Gene Information

Name : CKO_01790 (CKO_01790)
Accession : YP_001453355.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 1703336 - 1705279 bp
Length : 1944 bp
Strand : -
Note : decatenates replicating daughter chromosomes

DNA sequence :
ATGCGGTTGTTTATTGCCGAAAAGCCGAGTCTGGGCCGCGCCATTGCGGATGTGCTGCCAAAGCCGCACCGCAAAGGCGA
CGGCTTTATCGAATGCGGGAATGGACAGGTGGTGACCTGGTGCATCGGCCATCTGCTTGAACAGGCGCAGCCGGACGCGT
ATGACGGTCGTTATGCGCGCTGGAATCTGGCCGATCTGCCGATTGTGCCGGAAAAGTGGCAGCTCCAGCCACGTCCTTCC
GTGACGAAGCAGCTCAATGTCATTAAGCGCTTTTTACATGACGCAAGCGAAGTGATTCACGCGGGAGACCCGGATCGCGA
AGGGCAACTGCTGGTGGACGAGGTGCTGGATTATCTGCAACTGTCCCCGGAAAAACGCCAGCAGGTGCAGCGTTGCCTGA
TCAACGATCTTAACCCGCAGGCGGTGGAGCGTGCGATTTCCCGGCTGCGCGCCAACAGCGAATTTGTGCCGCTGTGCGTT
TCCGCGCTGGCGCGTGCGCGCGCCGACTGGCTGTACGGCATTAACATGACCCGCGCGTATACCCTTCTCGGGCGCAACGC
GGGCTACCAGGGCGTGCTCTCGGTAGGGCGTGTTCAGACACCGGTTCTCGGGCTGGTGGTTCGCCGCGATGAAGAGATCG
AGAACTTCGTCGCCAAAGATTTCTTTGAAGTGAAAGCGCATATCGTCACGCCAGCTGAGGAGCGGTTTACCGCCATCTGG
CAACCCAGTGAAGCGTGCGAACCGTATCAGGATGAAGAGGGGCGTTTGCTGCATCGTCCGCTGGCGGAGCATGTGGTGAA
TCGTATTAACGGTCAGCCCGCGATCGTCACCAGCTATAACGATAAACGGGAATCAGAATCTGCCCCGCTGCCGTTTTCGC
TGTCGGCGTTGCAGATTGAAGCGGCGAAACGCTTTGGTCTGAGCGCGCAGAACGTGCTTGATATCTGCCAGAAGTTGTAC
GAAACTCACAAATTAATTACCTATCCGCGTTCCGACTGCCGCTATCTGCCGGAAGAACATTTTGCCGGACGCCATGCGGT
GATGAACGCCATTGGCGTGCATGCCGCGGATTTGTTGCCGCAGCCGGTGGTTGACCCGGACACGCGAAACCGCTGCTGGG
ATGATAAAAAAGTTGACGCTCACCACGCGATCATCCCGACTGCGCGCAGTTCATCAATTTCCCTCAGCGACAATGAAGCG
AAGGTGTACAACCTGATCGCTCGCCAGTACCTGATGCAATTCTGCCCGGACGCGGTATTTCGCAAATGCGTCATTGAACT
GGAGATTGCGAAGGGGAAATTCGTCGCCAAAGCGCGTTTTCTGGCGGAGGCCGGATGGCGAACGCTGTTGGGCAATAAAG
AGCGTGACGAAGAGAACGACGGTACGCCGTTACCGGTGGTGGCGAAAGACGACGAACTGCTGTGCGAAAAGGGCGAGGTC
GTTGAGCGTCAGACCCAGCCGCCACGCCATTTTACCGATGCTACGCTGCTGTCCGCCATGACCGGGATTGCCCGTTTCGT
GCAGGATAAAGATCTGAAAAAGATCCTGCGAGCGACCGACGGACTGGGAACCGAAGCGACGCGCGCGGGCATTATCGAAC
TGCTGTTCAGGCGCGGATTCCTGACCAAGAAAGGGCGTTACATTCATTCAACGGATGCCGGGAAGGCCCTGATTCACTCG
TTACCGGAGATGGCTGCCCGACCGGATATGACGGCGCACTGGGAGTCTGTCCTGACACAAATCAGTGAAAAGCAGTGCCG
CTATCAGGATTTTATGCAGCCGCTGGTCGGCACGCTGTTTCAGTTGATCGATCAGGCTAAACGCACGCCGGTACGTCAGT
TCCGGGGCATTGTCGCGCCAGGCGGTGGCGGCGAGAAGAAAAAGAGCGCGCCCCGTAAGCGAGCGGCGAAAAAAAGCCCG
CCGTCAGAAGAGGCGAGCGTATAA

Protein sequence :
MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDGRYARWNLADLPIVPEKWQLQPRPS
VTKQLNVIKRFLHDASEVIHAGDPDREGQLLVDEVLDYLQLSPEKRQQVQRCLINDLNPQAVERAISRLRANSEFVPLCV
SALARARADWLYGINMTRAYTLLGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPAEERFTAIW
QPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLY
ETHKLITYPRSDCRYLPEEHFAGRHAVMNAIGVHAADLLPQPVVDPDTRNRCWDDKKVDAHHAIIPTARSSSISLSDNEA
KVYNLIARQYLMQFCPDAVFRKCVIELEIAKGKFVAKARFLAEAGWRTLLGNKERDEENDGTPLPVVAKDDELLCEKGEV
VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFRRGFLTKKGRYIHSTDAGKALIHS
LPEMAARPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLFQLIDQAKRTPVRQFRGIVAPGGGGEKKKSAPRKRAAKKSP
PSEEASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 4e-103 41
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 3e-104 41
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 7e-112 41