Gene Information

Name : CKO_01218 (CKO_01218)
Accession : YP_001452794.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1174992 - 1175669 bp
Length : 678 bp
Strand : +
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9

DNA sequence : 
ATGAAAGTATTACGTGTTTGCGCCACCGCGTTGGCGCTGTTTGTTATCGGCGTTTCCAGTGTGAATGCTGGTGTTTCCAT
TGGCGGAACACGGGTTATTTACGATGGCGGTAAAAAAGAAGCGTCATTAAGCGTCAGTAATCCCGATAATATTCCGTATT
TAATTCAGTCGTGGATCGAAACGCAAAATGACGGTAAGGGCAAAGCCCCTTTTATTATTACACCGCCGCTTTACCGACTT
GATAACGGGCAGCAAAACGTAATGCGTATTATTCGGGCGGGAAATCTGCCTGAGGATAAAGAGTCCCTGTTTTGGCTGAA
TATTAAATCGATACCGTCGGCCCAACGTAAGGATAATACGTTACAGATTGCGGTTAAAACACGAATAAAACTGATTTATC
GGCCTGCGTTGCTGAGCAAGTCAACGCCTGAAGCGCAGCTCGGAAAGTTAAGCTGGAGCCGGAGCGGGGCGTTTATTCAG
GTAAATAACCCCACGCCTTATTACGTTAATTTCAATGAAATTACCGTATCCGGTAAGAAAGTTGACAATGTAACGTTTGT
GGCGCCGGGGAGTACCGCCCGTTTTGCACTGCCTTCGGGCGGAAATGGCGGAAGCGTGAAATTCAGGATTATTAATGATT
ACGGTGGAATCAGCGAGGAGTACAGCGGTTCTGTTTAA

Protein sequence : 
MKVLRVCATALALFVIGVSSVNAGVSIGGTRVIYDGGKKEASLSVSNPDNIPYLIQSWIETQNDGKGKAPFIITPPLYRL
DNGQQNVMRIIRAGNLPEDKESLFWLNIKSIPSAQRKDNTLQIAVKTRIKLIYRPALLSKSTPEAQLGKLSWSRSGAFIQ
VNNPTPYYVNFNEITVSGKKVDNVTFVAPGSTARFALPSGGNGGSVKFRIINDYGGISEEYSGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-39 45
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-38 42
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 5e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_01218 YP_001452794.1 hypothetical protein VFG0455 Protein 4e-39 43
CKO_01218 YP_001452794.1 hypothetical protein VFG0445 Protein 7e-39 43
CKO_01218 YP_001452794.1 hypothetical protein VFG0911 Protein 2e-38 42
CKO_01218 YP_001452794.1 hypothetical protein VFG1644 Protein 2e-38 42
CKO_01218 YP_001452794.1 hypothetical protein VFG0875 Protein 6e-38 41