Gene Information

Name : EcE24377A_E0068 (EcE24377A_E0068)
Accession : YP_001451603.1
Strain :
Genome accession: NC_009790
Putative virulence/resistance : Unknown
Product : IS66 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 65257 - 66795 bp
Length : 1539 bp
Strand : -
Note : identified by match to protein family HMM PF03050

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACTGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCTGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGTGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT
GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG
GGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACTCATCTTGCCTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT
CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC
AGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC
AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAAACC
CTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAACCAGTGGCCGGCGCTGACGTACTATGCAGATGA
TGGCTGGGCTGAGGCGGACAATAACATCGCTGAAAATGCGTTGCGGATGGTCAGTCTGGGCCGCAAAAACTACCTGTTCT
TCGGTTCGGATCATGGAGGAGAGCGGGGAGCGCTGCTGTACAGCCTGATCGGGACGTGCAAACTGAACGGAGTGGAGCCA
GAAAGCTACCTCCGCTATGTCCTTGACGTCATAGCCGACTGGCCGATAAACCGGGTCGGCGAACTGCTCCCCTGGCGCGT
AGCACTGCCGACTGAATAA

Protein sequence :
MNDISSDDIFLLKQRLAEQEALIHALQEKLSNWEREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMT
DGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY
RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT
LSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEP
ESYLRYVLDVIADWPINRVGELLPWRVALPTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08460.1 unknown Not tested SRL Protein 0.0 99
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 98
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 98
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 98
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 97
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 97
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 97
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 97
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 0.0 97
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 97
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 97
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-168 96
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 96
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 96
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-152 65
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-155 64
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-155 64
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 7e-105 62
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-140 60
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-101 59
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-130 56
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 4e-117 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 4e-117 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_E0068 YP_001451603.1 IS66 family transposase VFG1051 Protein 0.0 99
EcE24377A_E0068 YP_001451603.1 IS66 family transposase VFG0793 Protein 0.0 98
EcE24377A_E0068 YP_001451603.1 IS66 family transposase VFG1700 Protein 1e-168 96
EcE24377A_E0068 YP_001451603.1 IS66 family transposase VFG1736 Protein 1e-124 63
EcE24377A_E0068 YP_001451603.1 IS66 family transposase VFG1513 Protein 4e-105 62