Gene Information

Name : EcE24377A_E0049 (EcE24377A_E0049)
Accession : YP_001451587.1
Strain :
Genome accession: NC_009790
Putative virulence/resistance : Unknown
Product : IS1, transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 47535 - 47810 bp
Length : 276 bp
Strand : -
Note : identified by match to protein family HMM PF03811

DNA sequence :
GTGGCTTCCATCTCCATCAGTTGTCCCTCCTGCTCAGCTACTGAAGGCGTGGTGCGTAACGGTAAAAGTACTGCCGGACA
TCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACACACC
AGAAAATCATTGATATGGCCATGAATGGTGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATT
TTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA

Protein sequence :
MASISISCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTI
LRHLKNSGRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 6e-32 98
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 4e-32 98
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 4e-32 98
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 4e-32 98
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 4e-32 98
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 6e-32 98
insA AEZ06026.1 InsA Not tested AbaR24 Protein 4e-32 98
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 6e-32 98
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 6e-32 97
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 5e-32 97