Gene Information

Name : EcE24377A_E0044 (EcE24377A_E0044)
Accession : YP_001451583.1
Strain :
Genome accession: NC_009790
Putative virulence/resistance : Unknown
Product : IS1, transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 43488 - 43883 bp
Length : 396 bp
Strand : +
Note : identified by match to protein family HMM PF03400

DNA sequence :
GTGGCGCTTATCTGCGAGCTTGATGAGCAATGGGGCTACGTTGGCAGTAAAGCCCGACAACACTGGCTCTGGTACGCGTA
CAACACCAAAACAGGCGGTGTACTGGCCTACACTTTTGGTCCCCGAACCGATCAAACGTGCCGGGAGCTACTGGCACTGC
TTACACCCTTCAACATCGGCATGCTCACCAGCGATGACAGGGGCAGCTATGGCCGGGAGGTGCCGAAGAATAAGCATCTG
ACCGGAAAAATATTCACCCAACGCATTGAGCGTAATAATCTGACGCTACGCACCCGCATTAAGCGGTTGGCTCGTAAAAC
AATCTGCTTCTCACGCTCAGTTGAGATCCACGAAAAAGTGATCGGAGCGTTTATCGAAAAACATATGTTCTACTAA

Protein sequence :
MALICELDEQWGYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGMLTSDDRGSYGREVPKNKHL
TGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1123 NP_286658.1 hypothetical protein Not tested TAI Protein 3e-43 70
Z1562 NP_287066.1 hypothetical protein Not tested TAI Protein 3e-43 70
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-25 47
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 5e-26 47
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 5e-26 47
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 5e-26 47
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-25 47
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 8e-26 47
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 5e-26 47
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 2e-25 46
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-25 46
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-25 46
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-25 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_E0044 YP_001451583.1 IS1, transposase orfB VFG0612 Protein 5e-26 46