Gene Information

Name : EcE24377A_F0086 (EcE24377A_F0086)
Accession : YP_001451440.1
Strain :
Genome accession: NC_009786
Putative virulence/resistance : Unknown
Product : IS2, transposase orfB, truncation
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 74269 - 74940 bp
Length : 672 bp
Strand : +
Note : identified by match to protein family HMM PF00665

DNA sequence :
ATGACATTGTCTGTTTTTATAACGGTAATCTCAGGCCATGACAAGCCGCAGCCGCCAGGCTGCCTACTCGAGCGAAAAAC
CGCTGTACCGCCATCGAAACGGGCACATACTGGCAAAGTGGCCGTGAAAGAAAGCAATCAACGATGGTGCTCTGACGGGT
TCGAGTTCGAGTTTCGCTGTGATAACGGAGAAAAACTGCGAGTCACGTTCGCGCTGGACTGCTGTGACCGTGAGGCACTG
CACTGGGCGGTCACTACGGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGG
CAACGAGCTTCCGGCGTCTCCAGTAGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGGCAGTTTG
CCCGGATGTTGGGGCTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAA
ACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGA
GCATTATAACGAATGGCATCCGCATAGTGCACTGGGTTATCGCTCGCCACGGGAATATCTACGGCAGCAAGCTAGTAATG
GGTTAAGTGATAACAGGTGTCTGGAAATATAG

Protein sequence :
MTLSVFITVISGHDKPQPPGCLLERKTAVPPSKRAHTGKVAVKESNQRWCSDGFEFEFRCDNGEKLRVTFALDCCDREAL
HWAVTTGGFNSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVK
TIKRDYISVMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQQASNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 1e-88 98
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 6e-88 97
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 2e-86 96
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-86 95
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 3e-86 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_F0086 YP_001451440.1 IS2, transposase orfB, truncation VFG0649 Protein 1e-86 95