Gene Information

Name : SGO_0878 (SGO_0878)
Accession : YP_001450174.1
Strain : Streptococcus gordonii Challis
Genome accession: NC_009785
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 924883 - 925548 bp
Length : 666 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCCAATTTTAGAATTAAAAGGGGTTACCAAAGAATATGGTCAGGGGCATACGCTGGTTCAAGCCCTGAAGCCAACTGA
TTTTCAACTGGAAGCGGGACAGTTTGAAGCTATTATTGGGCCGTCAGGCTCAGGTAAAACAACCTTTCTGACCTTGCTGG
GGCATTTGCAAACTCCCTCAAAAGGACAGATTCTCCTGCACGGGAAAGATACCTCCCAGCTCAAGGAAAAGGAACGAGCA
GCTCTGCGTTTCAATGATTTCGGCTTCATTTTGCAGGCCTCCAATCTCATTCCTTTTTTGAAAATTGAAGACCAGTTCCA
GCTGATTGACCGCTTATCTAAGAAGGAAAGAACGGATCTAGACAGTCTGATTGAGTTGCTGGATCTTAAAGGAACTCTCA
AGCAATATCCGAAAGAATTGTCCGGCGGGGAAAGGCAGAGAGCTGCTATCGCTAGAGCGCTTTACAATAGCCCGGATATT
ATCTTAGCTGATGAGCCGACAGCTAGTTTGGATACGGAGCGGGCTAAGCGTGTGGTCCATTTGCTTAAAGAGGTTACCCA
GAAATTCAATAAGAGTGTAGTCATGATTACCCATGATACCCGCCTACTGGATGAGGTTGATAAGATCTATGAAATGCAGG
ATGGTACACTAACTCAAGTTCGATAA

Protein sequence : 
MPILELKGVTKEYGQGHTLVQALKPTDFQLEAGQFEAIIGPSGSGKTTFLTLLGHLQTPSKGQILLHGKDTSQLKEKERA
ALRFNDFGFILQASNLIPFLKIEDQFQLIDRLSKKERTDLDSLIELLDLKGTLKQYPKELSGGERQRAAIARALYNSPDI
ILADEPTASLDTERAKRVVHLLKEVTQKFNKSVVMITHDTRLLDEVDKIYEMQDGTLTQVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-46 48
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 5e-41 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGO_0878 YP_001450174.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-41 41