|
Name : secA (SGO_0415) Accession : YP_001449731.1 Strain : Streptococcus gordonii Challis Genome accession: NC_009785 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 458246 - 460762 bp Length : 2517 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCAAATATTTTAAGAACAATTATCGAAAATGATAAAGGTGAATTAAGAAAATTAGAGAAAATGGCAAATAAGGTCAT TGCTTATAGTGACCAGATGGCTGCCTTGTCCGATGAGGAATTAAAGGCTAAAACAGATGAATTTAAACAACGTTATCAGA ACGGTGAAAGTTTAGATGACTTGCTTTATGAAGCCTTCGCAGTTGTCCGTGAGGGTGCGAAACGTGTTCTTGGCCTCTAT CCTTATCCAGTACAGATTATGGGGGGGATTGTTCTCCATCATGGTGACGTACCAGAGATGCGTACAGGTGAAGGTAAAAC TCTTACTGCGACCATGCCTGTTTACTTGAATGCGTTGGCAGGAGAAGGAGTTCACGTTGTAACGGTCAATGAATATCTGA CAGAACGTGATGCGACCGAAATGGGTGAACTGTACTCTTGGTTAGGGCTTTCAGTTGGTATTAACTTGGCGGCTAAATCT CCAGCTGAGAAGAGAGAAGCCTATGCTTGTGACATCACCTACTCAACGAACTCAGAAATTGGCTTTGATTACCTCCGTGA TAACATGGTGGTTCGTGCTGAAAACATGGTTCAGCGCCCACTTAACTATGCCTTGGTCGATGAGGTGGATTCCATTCTGA TCGATGAAGCTAGAACCCCTCTGATTGTTTCTGGACCAGTTTCATCTGAAACTAATCAGCTTTACCACATGGCGGATAGC TTCGTTAAGAGTCTTAACAAGGATGATTACATCATAGATGTGCCATCAAAAACAATCGGCTTGTCTGACTCTGGAATTGA CAAGGCAGAAAGCTATTTCAAATTAGATAATCTCTATGATATTGAAAATGTGGCATTGACTCACTTCATTGATAATGCCT TGCGTGCTAACTATATCATGATTTTGGACATCGATTATGTGGTTAGCGAAGAACAAGAAATTCTGATCGTTGACCAGTTC ACCGGTCGTACCATGGAAGGACGTCGCTATTCTGACGGACTTCACCAGGCCATTGAAGCTAAAGAAGGTGTTCCGGTTCA AGATGAAACCAAGACATCTGCTTCTATTACCTACCAAAACCTCTTCCGTATGTATAAAAAACTGTCTGGAATGACTGGTA CAGCTAAGACTGAGGAAGAAGAATTCCGCGAAACTTATAATATCCGTGTTATCCCAATTCCAACTAACCGCCCAATTGCT CGTATTGACCATGAGGATTTACTTTACCCTAGTTTAGAATCTAAATTTAAGGCAGTTGTAGAAGACGTGAAAGAACGCCA TCTTAAAGGACAGCCTGTTCTGGTCGGTACAGTTGCAGTTGAAACCAGTGACTATCTTTCTAAAAAGCTGGTTGCAGCAG GAATTCCTCATGAGGTATTGAATGCTAAGAACCACTATCGTGAAGCGCAAATCATTATGAATGCTGGCCAACGCGGTGCA GTTACAATTGCAACCAATATGGCTGGTCGTGGTACCGATATTAAGCTTGGAGAAGGTGTGCGCGAATTGGGCGGTCTCTG TGTGATTGGTACAGAACGCCATGAAAGCCGTCGTATTGACAATCAGTTACGTGGACGTTCTGGTCGTCAGGGAGATCCAG GTGAATCTCAATTCTATCTATCTCTTGAAGATGAGCTGATGCGTCGTTTTGGTTCTGAGAGAATCAAAGCTGTCTTGGAT CGTTTCAAACTGAGCGAAGAAGAGTCTGTCATTAAGTCTAAGATGTTTACGCGCCAAGTTGAAGCGGCTCAAAAACGGGT TGAAGGAAATAACTATGATACTCGTAAGCAAGTCCTTCAGTATGACGATGTGATGCGTGAACAACGTGAAATTATCTACG CTGAACGTCATGATGTTATCACAGCTAATCGGGATTTGGCTCCAGAGATTCACGCTATGATCAAACGGACTATTGATCGT TTTGTTGATGGAAATAGCAGAGCTCCTCAAGAAGAAAAATTGGATTCAATTTTGTACTTTGCTAAGTATAACTTGGTTCC GGAAGAGTCAATTTCATTGAGCGATCTTCAAGGTTTATCTGATGAGGAAATCAAGGCTAGCTTATACGAACGTGCTTTGG AAGTCTACAATAGTCAAATTGCTAAACTTCGTGATGAAGAAGCTGTTCGAGAATTCCAAAAAGTATTGATTCTACGTGTT GTAGATAACAAGTGGACAGATCACATTGATGCATTGGATCAGCTTCGTAATGCTGTAGGTCTTCGAGGCTATGCTCAAAA TAATCCTGTTGTTGAATACCAATCTGAAAGTTTCAGAATGTTTAACGATATGATTGGTTCGATTGAGTTTGATGTGACCC GTCTTATGATGAAAGCACAAATTCATGAGCAAGAGCGTCCTCGTACAGAGCACAATATTGTAACAACAGCAACGCGCAAT ATCTCAGCGCAAGAATCAGACCTGCCAGCAGACGTTGATTTGGCAAAGGTTGGCCGGAATGAACTATGCCCATGTGGCTC AGGTAAGAAGTTTAAAAATTGCCACGGCCGTCGTTAA Protein sequence : MANILRTIIENDKGELRKLEKMANKVIAYSDQMAALSDEELKAKTDEFKQRYQNGESLDDLLYEAFAVVREGAKRVLGLY PYPVQIMGGIVLHHGDVPEMRTGEGKTLTATMPVYLNALAGEGVHVVTVNEYLTERDATEMGELYSWLGLSVGINLAAKS PAEKREAYACDITYSTNSEIGFDYLRDNMVVRAENMVQRPLNYALVDEVDSILIDEARTPLIVSGPVSSETNQLYHMADS FVKSLNKDDYIIDVPSKTIGLSDSGIDKAESYFKLDNLYDIENVALTHFIDNALRANYIMILDIDYVVSEEQEILIVDQF TGRTMEGRRYSDGLHQAIEAKEGVPVQDETKTSASITYQNLFRMYKKLSGMTGTAKTEEEEFRETYNIRVIPIPTNRPIA RIDHEDLLYPSLESKFKAVVEDVKERHLKGQPVLVGTVAVETSDYLSKKLVAAGIPHEVLNAKNHYREAQIIMNAGQRGA VTIATNMAGRGTDIKLGEGVRELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRFGSERIKAVLD RFKLSEEESVIKSKMFTRQVEAAQKRVEGNNYDTRKQVLQYDDVMREQREIIYAERHDVITANRDLAPEIHAMIKRTIDR FVDGNSRAPQEEKLDSILYFAKYNLVPEESISLSDLQGLSDEEIKASLYERALEVYNSQIAKLRDEEAVREFQKVLILRV VDNKWTDHIDALDQLRNAVGLRGYAQNNPVVEYQSESFRMFNDMIGSIEFDVTRLMMKAQIHEQERPRTEHNIVTTATRN ISAQESDLPADVDLAKVGRNELCPCGSGKKFKNCHGRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 8e-146 | 42 |
