Gene Information

Name : ssb (SGO_1902)
Accession : YP_001451168.1
Strain : Streptococcus gordonii Challis
Genome accession: NC_009785
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1975587 - 1975982 bp
Length : 396 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGTACAATAAAGTCATTATTATCGGTCGTTTGACGGCCACACCAGAATTGCACAAAACTAGCAATGAAAAATCTGTCAC
ACGCGCAACGATTGCTGTCAACCGCCGTTACAAGGATCAAAATGGTGAGCGCGAAGCAGACTTCATTAATATCGTCCTTT
GGGGCAAATCAGCTGAGACTCTAGCTAGTTATGCCAGCAAAGGAAGCTTAATTTCTCTGGACGGCGAATTACGGACCCGT
CGTTATGAGAAAGATGGCGTAACTCACTATGTCACAGAAGTGCTTGGTCATGGTTTCCAACTTCTTGAAAGTCGTGCCCA
GCGGGCTATTCGTGAAAATAATTCTGGGGCTGATTTAGCTGATCTAGTCTTGGAAGAAGAGGAACTTCCTTTCTAA

Protein sequence :
MYNKVIIIGRLTATPELHKTSNEKSVTRATIAVNRRYKDQNGEREADFINIVLWGKSAETLASYASKGSLISLDGELRTR
RYEKDGVTHYVTEVLGHGFQLLESRAQRAIRENNSGADLADLVLEEEELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 7e-20 50
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 6e-23 50
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-19 50
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 8e-23 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-19 50
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-19 50
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-17 50
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-18 46
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-20 45
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-20 45
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 1e-12 44