Gene Information

Name : ssb-1 (SGO_1880)
Accession : YP_001451146.1
Strain : Streptococcus gordonii Challis
Genome accession: NC_009785
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1956659 - 1957150 bp
Length : 492 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGATAAATAACGTTGTACTTGTAGGTCGCATGACCCGCGATGCTGAACTACGCTATACACCGCAAAACCAAGCGGTTGC
AACATTTACATTAGCTGTTAATCGTAATTTCAAAAACCATAATGGTGAAAGAGAAGCAGACTTTATCAATGTTGTCATTT
GGCGTCAGCAGGCAGAAAATCTTGCAAACTGGGCTAAAAAAGGTGCTCTAGTCGGAATTACAGGTCGTATTCAGACCCGT
AATTATGAAAATCAGCAAGGTCAACGTGTCTACGTCACTGAGGTCGTTGCAGACAACTTCCAACTATTGGAAAGTCGTAC
AAGCCGTGAAGGACAGTCTGGAGGCTATACTCCAAATAACTTTGGCGGTAATGCAGCACCAAGCTTCGGAGGCGCTGACT
CGTCTCACCAAGTACCGAATTTTTCTCGTGATGAGAATCCATTTGGTAACTCAAATCCAATGGATATCTCAGATGATGAT
CTGCCATTTTAA

Protein sequence :
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNHNGEREADFINVVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRTSREGQSGGYTPNNFGGNAAPSFGGADSSHQVPNFSRDENPFGNSNPMDISDDD
LPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-41 66
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-37 57
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-37 57
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-33 49
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-33 49
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-33 49
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-33 49
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-33 49
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-33 49