Gene Information

Name : pdp (SGO_1079)
Accession : YP_001450368.1
Strain : Streptococcus gordonii Challis
Genome accession: NC_009785
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.2
Position : 1122706 - 1123983 bp
Length : 1278 bp
Strand : +
Note : Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway

DNA sequence :
ATGAGAGCTGTCGACATTATTCAAAAAAAACGTGATGGTTTGGAATTAACTAAAGAAGAAATTCAATGGTTGATTGATGG
GTATGTTGCTGGTACTGTTCCAGATTATCAAATGTCTGCTTTTGCAATGACAATTTACTTTAAGGGAATGACAACCAGAG
AAATTTCAGATCTGACAATGACAATGGTTGCGACAGGTCAGCAAATTGATTTATCAGAAATCTCTGGTATTAAAGTAGAT
AAGCATTCTACTGGTGGTGTTGGTGACAAGGTTACCTTAATCCTTGTTCCCTTGGTTGCTAGCTTTGGTGTACCAGTTGC
CAAGATGAGTGGGCGAGGACTAGGTCATACGGGCGGAACGATCGACAAACTGGAATCTGTAAAAGGATTTCAAGTTGAGC
GCAGTCAGGAAGAATTTATCAAACAAGTCCAAGATATCGGGCTTTCTGTAATTGGTCAGTCAGATCAACTTGTGAAAGCA
GATAAGTTACTTTATGCTCTTCGTGATGTGACAGCAACAGTCGATACAATTCCTTTAATTGCGAGCTCTGTCATGAGTAA
GAAAATCGCTGCCGGAGCAGATAGTATCCTTTTAGATGTGACAGTTGGTGAAGGCGCCTTTATGAAGAATATTGAAGATG
CACGTCGCCTTGCTCAGACCATGGTTGAGTTAGGTAAAGCTGTAGGCAGACGGACAGTAGCTGTTATTACAGATATGAGC
CAACCTGTGGGAACAAGCATTGGTAATCGTTTGGAAATCCTTGAGGCTCTGGAAATTCTTCAAGGAAAAGGCAGAGAAGA
TGTAACCCATTTTATCTGTGAGTTAGCTCAGATTATGCTTAGCTTAGCAAATGTGGAAAAAACTATAGAGGAAGTTCGCG
AGCATGTAATGAACGGCTCTGCTCTTGAAAAATTTGAAGCTATGATTCAAGCGCAGGGCGGTGATTTGGAAGACCTTTAT
AGGTCTTCTTCAGCTCAGTATATAGTAGACGTCACTGCAGATCAGTCTGGTTTCATTTCTGAACTACCAGCTATGGAATT
CGGTTTATTTGCTATGCGTTTAGGTGCTGGTCGAGCAGTTAAATCTGACAAACTAGACTATGAAACCGGAATTGTTTTTG
AGAAAAAAGTTGGCGAAGTTGTTCAGTCTGGTGAAGTAGTAGCTAAAATCTATGCTAATCAAAAAATCTCTGAGGAAATG
CTTACAGAATTCAAAAAAAATGTTAGAATAGATGTCGAACGGAAAAAAGTAAGCGAAATCATTGAGGTCATTTCTTGA

Protein sequence :
MRAVDIIQKKRDGLELTKEEIQWLIDGYVAGTVPDYQMSAFAMTIYFKGMTTREISDLTMTMVATGQQIDLSEISGIKVD
KHSTGGVGDKVTLILVPLVASFGVPVAKMSGRGLGHTGGTIDKLESVKGFQVERSQEEFIKQVQDIGLSVIGQSDQLVKA
DKLLYALRDVTATVDTIPLIASSVMSKKIAAGADSILLDVTVGEGAFMKNIEDARRLAQTMVELGKAVGRRTVAVITDMS
QPVGTSIGNRLEILEALEILQGKGREDVTHFICELAQIMLSLANVEKTIEEVREHVMNGSALEKFEAMIQAQGGDLEDLY
RSSSAQYIVDVTADQSGFISELPAMEFGLFAMRLGAGRAVKSDKLDYETGIVFEKKVGEVVQSGEVVAKIYANQKISEEM
LTEFKKNVRIDVERKKVSEIIEVIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-88 50