Gene Information

Name : VIBHAR_05094 (VIBHAR_05094)
Accession : YP_001447227.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 330482 - 332113 bp
Length : 1632 bp
Strand : -
Note : KEGG: nwi:Nwi_0292 1.9e-144 ABC transporter, ATPase subunit K02031:K02032; COG: COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGTCCACACAAACCATTCTTTCGGTGAACAACCTGTCTGTCAGCTTTACGACAAACGATGGTATCGTCGATGCAGTAAA
GAATGTTAGCTTTGATCTTAAAGCTGGTGAAACGCTGTCTATCGTAGGCGAATCTGGTTCAGGAAAATCGGTATCGACCA
ATGCGTTGATGAGGTTGCTGCCAGATAATGCCATTTTGCACGCCGATTCCTCTATCGTCTTTGAAGGCGAATCAATCCTA
GATAAATCCGAACGCCAAATGCAGAGTATCCGCGGCGATCGTATTGGTATGATTTTCCAAGAACCCATGACTTCGCTAAA
TCCATACATGCGTGTGGGTATTCAAGTGGCCGAAGCCATCATGTGCCATCGTCCAGTGAGCAAAAAACAAGCGAAGCAAA
AAGTTCTCGAGTTGTTCGATTTAGTGCACTTACCAAACCCGCAACAAGCTTACGACAAGTATCCACATGAATTCTCCGGC
GGTCAGTTGCAACGCATCATGATTGCCATGGCTTTGATTAACGAGCCCGACATTCTGATCGCCGATGAACCAACAACGGC
GCTCGACGTGACCGTTCAAGCTGAAGTGCTTTATTTGATCAAAGAGATCCAAGCGAAAATGGGCATGGCGATTCTCTTCA
TTACTCATGACTTAGGTGTGGTGAAACACTTTGCCGACCGAGTCTTGGTGATGTGTAAAGGTAAAGTGGTCGAAGAAGGC
ATCACAGAAACACTCTTTTCTGATCCTCAGCATGATTACACTAAGATGCTGATTAACTCGATTCCAAAAGGCAGTATAGA
TCCCATTAAAGAAGGGGCAACTGAACTGCTTAAAGCCGATGATATTCGCGTTAAATTTCTTATTAAGCCTCACTTTATCG
CAAGTAAGAACGAATACTTTGAGGCCGTAAAAGGTATCTCTTTAGAACTAAAACAGGGTGAAACGCTAGGTATCGTGGGT
GAATCTGGTTCAGGCAAATCAACGCTTGGCCGAGCCTTGATCGGATTGTTGCCCTCAACCGGGAAAATTCAGTTTAAAGG
GCAAGATCTAGCACTTCTGACGGACAAAGAACGCTTCGAACTGAAGAGAGACGTACAAATGGTCTTCCAAGACCCATACG
GTTCACTTTCACCAAGAATGACCGTTGGTGACATCATCACGGAAGCTCTCACCGTGCATCAACCTCAAATGAGTAAAGCA
GAACGAATGCAAAAAGCACGTGATGTTCTGCGAGAGGTGCGCTTAGACCCAGCATCTATTAACCGTTACCCACACGAGTT
TTCTGGCGGTCAACGCCAACGTATTGCGATCGCGCGCGCGTTGATTCTGGAACCCTCTTTCATTCTGCTTGATGAACCCA
CGTCGGCACTGGACCGCTCCGTTCAACTGACCGTAATTGATCTTCTGAAAGATCTGCAGAAGAAGCATAACATCGGCTAC
TTGTTCATCAGCCACGATCTCTCTGTTGTGAAAGCACTGTCTGATCGTGTGTTAGTCATGCAAAAGGGTGAAGTGATGGA
ACAAGGTACGGCGGAAGAGATCTTCCATAATCCAAAAAGCGATTACACGAGAAAGCTGATTGATGCCTCATTTGATCTTG
AAAACAATGAAAATCAACATGATGCAGCCTAG

Protein sequence :
MSTQTILSVNNLSVSFTTNDGIVDAVKNVSFDLKAGETLSIVGESGSGKSVSTNALMRLLPDNAILHADSSIVFEGESIL
DKSERQMQSIRGDRIGMIFQEPMTSLNPYMRVGIQVAEAIMCHRPVSKKQAKQKVLELFDLVHLPNPQQAYDKYPHEFSG
GQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLYLIKEIQAKMGMAILFITHDLGVVKHFADRVLVMCKGKVVEEG
ITETLFSDPQHDYTKMLINSIPKGSIDPIKEGATELLKADDIRVKFLIKPHFIASKNEYFEAVKGISLELKQGETLGIVG
ESGSGKSTLGRALIGLLPSTGKIQFKGQDLALLTDKERFELKRDVQMVFQDPYGSLSPRMTVGDIITEALTVHQPQMSKA
ERMQKARDVLREVRLDPASINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIDLLKDLQKKHNIGY
LFISHDLSVVKALSDRVLVMQKGEVMEQGTAEEIFHNPKSDYTRKLIDASFDLENNENQHDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-83 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-83 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-83 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-83 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 6e-106 43