Gene Information

Name : VIBHAR_04992 (VIBHAR_04992)
Accession : YP_001447126.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Virulence
Product : positive response regulator for pho regulon
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 246945 - 247715 bp
Length : 771 bp
Strand : +
Note : KEGG: eci:UTI89_C0420 4.4e-35 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGTGCAAAGTGAGGATACTTGAAGGCAAGGAAAGGACCATGGAACAACAGGCAATCAATTTAGTCGCGAACATCTTGCT
GGTGGAAGATGACGATGATTTGGCGGAACTGGTTCAAATACATCTCAAGTTTCAAGGGCATCAAGTGTTGAGAGCAACGA
ATATCGCCGAGGCTAAAGCGCAATATCAACAACAGTCTTTTGATTTATTGATCCTTGATAGAGGTTTGCCAGACGGTGAT
GGTCTCGACGTCTGCCATTATTTGCGTCAGCAACAAGATTGGAGTCCTGTACTTATGCTGACAGCCAGAGATGGGGAGAT
GGATAAAGTCGACGGTTTAGAAGCGGGAGTGGATGATTACATTACCAAGCCATTTAGCGTATTAGAGTTCCAAGCGCGAG
TTCGCAATGTACTGCGTCGTGTTAGTCATACCACGGAAGTGCAAACAGATAAAAACCTCGTAGAAGATGCGATGGATTTT
GGTCCGTTAAGAATTATTCCAGAGTTGCATCAAGTCTCTTTGCATGACAAGGACGTGACCCTCACTGCGACCGAGTTTAC
CTTGCTTCAATTCCTCGCGACGCGTCCGGGTAGAGTCTATAGCAAAGATGAATTGCTTGACCACGTTTGGAACACCAACC
ATTCCGGTTATCACCATACCGTGTGTAGCACCATCAACCGCTTACGTAGCAAGTTGTCTTTGTCTGATTCTGATCATCAT
TTCATCCAGACCGTCTGGGGTGTTGGGTATAAATTTCAACCTAGACAATGA

Protein sequence :
MCKVRILEGKERTMEQQAINLVANILLVEDDDDLAELVQIHLKFQGHQVLRATNIAEAKAQYQQQSFDLLILDRGLPDGD
GLDVCHYLRQQQDWSPVLMLTARDGEMDKVDGLEAGVDDYITKPFSVLEFQARVRNVLRRVSHTTEVQTDKNLVEDAMDF
GPLRIIPELHQVSLHDKDVTLTATEFTLLQFLATRPGRVYSKDELLDHVWNTNHSGYHHTVCSTINRLRSKLSLSDSDHH
FIQTVWGVGYKFQPRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-26 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_04992 YP_001447126.1 positive response regulator for pho regulon VFG1563 Protein 6e-27 41
VIBHAR_04992 YP_001447126.1 positive response regulator for pho regulon VFG1702 Protein 1e-26 41