Gene Information

Name : VIBHAR_07054 (VIBHAR_07054)
Accession : YP_001449154.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Resistance
Product : acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2130836 - 2131489 bp
Length : 654 bp
Strand : -
Note : KEGG: vpa:VPA1748 3.3e-94 chloramphenicol acetyltransferase K00638; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: cytoplasmic, score: 23

DNA sequence :
ATGAATGCGTTCGATACTTGGTTAAAAGGGCAAGTGATCAAAGAACATGTCACCAACCCGAATATTGAGGTAGGAGATTA
CAGTTATTACTCGGGGTTTTATCACGGTAAAACATTTGAAGATCAATCAGTTCGTTATTTGATGGGCGACAGCGTTACCC
AACAAGAGTGGCAAGATGGCGCTTATGGCGAAGTGGACAAGCTGATCATTGGCAAGTTCTGTTCAATCGCTTCTGGCGCG
ACCTTTATGATGGCTGGCAATCAAGGCCATCGGGTAGATTGGGTTTCGACCTTTCCATTCTCTCCTGAAGAGTTTGGAGA
AGATGTACAAAGCGGCTTTGAACGCGCAGGTGATACCATAGTCGGTAATGACGTGTGGATTGGCAGCGAAGCGATGATCA
TGCCGGGCGTGAAGATTGGAGATGGTGCCGTGATTGGTGCGCGCTCAGTCATCACTAAAGATGTCCCGCCCTACTCGATT
GTTGTTGGTCACAATCATATTGTTCGCCAGCGCTTTGACGACGAATGCGTTGCCATGTTGTCAGAAATAAAATGGTGGGA
TTGGCCCATTAACCATATTAAACAAGCAATGAAGATAATGTGCAGCAGTGATGTACGTGCGCTTGGTGCTTACTACCAAG
AACACATTGCCTAA

Protein sequence :
MNAFDTWLKGQVIKEHVTNPNIEVGDYSYYSGFYHGKTFEDQSVRYLMGDSVTQQEWQDGAYGEVDKLIIGKFCSIASGA
TFMMAGNQGHRVDWVSTFPFSPEEFGEDVQSGFERAGDTIVGNDVWIGSEAMIMPGVKIGDGAVIGARSVITKDVPPYSI
VVGHNHIVRQRFDDECVAMLSEIKWWDWPINHIKQAMKIMCSSDVRALGAYYQEHIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-44 54
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-43 53
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-43 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_07054 YP_001449154.1 acetyltransferase AY123251.gene2.p01 Protein 6e-45 54
VIBHAR_07054 YP_001449154.1 acetyltransferase JF268688.1.gene6.p01 Protein 2e-42 54
VIBHAR_07054 YP_001449154.1 acetyltransferase AF322577.2.gene4.p01 Protein 3e-43 53
VIBHAR_07054 YP_001449154.1 acetyltransferase AY740681.1.gene5.p01 Protein 3e-43 53
VIBHAR_07054 YP_001449154.1 acetyltransferase NC_002516.2.878374.p Protein 3e-42 51
VIBHAR_07054 YP_001449154.1 acetyltransferase CP001581.1.gene990.p Protein 9e-49 48
VIBHAR_07054 YP_001449154.1 acetyltransferase AM180355.1.gene2499. Protein 4e-33 43
VIBHAR_07054 YP_001449154.1 acetyltransferase NC_011595.7057349.p0 Protein 5e-27 42
VIBHAR_07054 YP_001449154.1 acetyltransferase NC_010410.6000796.p0 Protein 5e-27 42
VIBHAR_07054 YP_001449154.1 acetyltransferase NC_011586.7045146.p0 Protein 5e-27 41