Gene Information

Name : VIBHAR_07029 (VIBHAR_07029)
Accession : YP_001449130.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Resistance
Product : ABC-type transporter ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2105236 - 2105934 bp
Length : 699 bp
Strand : -
Note : KEGG: reh:H16_A1174 4.8e-45 ABC-type transporter, ATPase component: LPT family; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGATCGTTTTTAATCAACTTAGTCGCGATTACGCCCTTGGCAGCCAAACGGTGCGTGCCTTGCGAGAAGTGTCTGGTGA
AGTGTTTTCCGGCGAAATGGTGGCTCTGTGCGGGCCGTCTGGTTCAGGCAAAAGCACCTTACTTAACGTGCTTGGCATGC
TGGATACTCAATACCAAGGTCAGGTGACATTTGCGGGCAGCCCATACCCAACTGGGCAAATGCAGGCGGCGAAAATGCGC
CGAGAAAAGCTTGGCTTTATATTTCAAAAATTCAATCTTGTGCCTGTGATGACAGCGTTGGAGAACGTGGCGTATCCGCT
ACATCTCAACGGCTTCTCAAAAGCAGAACAAACTGAGCTCGCTACACAAATGCTAGAACACGTTGGCTTGGGCGAGTTTA
TTCATTATATGCCCGATAACTTGTCGGGCGGTCAGCAACAACGCGTGGCAATTGCTCGAGCGTTAGTACACAAACCAGCA
CTGGTGATTGCTGATGAGCCAACCGCAAGCCTTGATAGCCAAACGGCCAACAAGGTCATCGACATTATGAAAGGGCTCGG
ACACGAGCTAGGCACCACTTTTATCGTCGCTACACACGACCCTCGAATGGCATCCCGCTGCGATCGAACCATTGAGTTGG
TAGATGGCAAGATTACCCAAACGGACGCGAGTGTGGAGGAGGTTTCATGGGCAAGCTAA

Protein sequence : 
MIVFNQLSRDYALGSQTVRALREVSGEVFSGEMVALCGPSGSGKSTLLNVLGMLDTQYQGQVTFAGSPYPTGQMQAAKMR
REKLGFIFQKFNLVPVMTALENVAYPLHLNGFSKAEQTELATQMLEHVGLGEFIHYMPDNLSGGQQQRVAIARALVHKPA
LVIADEPTASLDSQTANKVIDIMKGLGHELGTTFIVATHDPRMASRCDRTIELVDGKITQTDASVEEVSWAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_07029 YP_001449130.1 ABC-type transporter ATPase component NC_008702.1.4606598. Protein 5e-34 46
VIBHAR_07029 YP_001449130.1 ABC-type transporter ATPase component NC_012469.1.7686878. Protein 1e-37 43