Gene Information

Name : VIBHAR_06058 (VIBHAR_06058)
Accession : YP_001448177.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 1231791 - 1233323 bp
Length : 1533 bp
Strand : -
Note : COG: COG4584 Transposase and inactivated derivatives; Psort location: nuclear, score: 23

DNA sequence :
ATGGCAAAAAAGAGAACTCCAATGAATAAAATCAAAGAGGTATTACGCCTTAAGTACGACTGCGGTCTCTCAAACCGCAG
CATCGCTTCCTGCCTTAAACTCGGCCCTTCCACCATATCGGAACTCCTGACTCGCTTTAAACAAAGCCAACTTGGCTGGC
CTCTGCCAGAAGGTTGCAGTGATGCAGACCTCACTAAGGCTCTGTATCACTCGAAGAAAGCCAGTCGCGACAAAGTCATG
CCAGACTTCACTCAATACGCTGTCGAACTCAGGCGTAAAGGCATGACGAAGATGCTGTTGTGGCAGGAATATCATGAGCA
ATATCAAGAGCAAGCTTACGCTTACACTCAGTTCTGCGAGCACTTCACTCGCTGGTTCAAAACCCAAAAACGCAGTATGC
GTCAGCTTCATGTTGCGGGAGATAAGCTGTTTATCGATTACTGTGGGCCTCGGCTTCAGGTGGTCAATCCTGACACAGGA
GAAGTGCGCGAAGCGGAGGTGTTCGTGGCGACCTTAGGTGCGTCCAATTACACCTATGTTGAAGCCTTCCCTAGCCAAGG
TAAGTCCTACTGGTTAGAGGCGCATGCTAATGCGTTCGAACACTTCGGCGGCGTACCACAACTCTTAGTTCCCGATAATC
TTCGCAGCGCGGTCACCAAAGCTAACCGTTATGAGCCAAGACTTAACGACAGCTATCAAAAGCTGGCGAACCACTATCAA
ACAGCAGTGATGCCAGCTCGCCCCTATAAACCGAAAGACAAAGCCAAAGCAGAGAATGCTGTGCTCCTGGTGGAACGCTG
GATCATGATGCGGCTGCGACACCAAACCTTCCATACCTTCAAAGAACTGAACCTAGCCATCCGTGAGCTTATGAATGACT
TAAACGAACGTAAGATGAAACAGTATGGTGCGAGTCGTAAAGCGCTGTTCGACAAGCTCGATAAACCCGCGTTAAAGCCT
CTGCCTAAGCAGCGTTACCTGTATACCGAAACCAAGCGAGCCAAAGTGGGGCCTGACTATCACATCGAATATCGCCGTCA
TTACTACTCGGTTCCCCATCAACTTGTTGGTCACCATGTCGAACTGGAAGCCTCTAACCGTCTGGTGCAGATCTACCATA
AAGGTAACTTGGTCGCCCAGCATCCACTCAGCCAAAGAGAACGTGGAAACAGCACCCAACCAGAGCATATGCCGAGTAAT
CATCAACATCAAAAGTGGTCGCCTGGACGCTTGCTCAACTGGGGAGCCAATATCGGCCCAGCCACACGAGAAGTCGTCAA
TAAGATGCTTAACTCCAAGCCTCATCCAGAGCAGTCTTATCGTTCCTGCCTTGGGCTGCTCAATCTGAGTAAAACGCATG
GCGAATCGCGCCTAGAGCAAGCCTGTAAAGATGCGCTGATGCTGACAAAACCCAACTACACCTTCGTCAATAATCTGTTG
AAGAACAATCGTGAAGGCCAACTAAGCAAAGACAAAGCGAGTACACCAAACCTCGTTCATAGCAATGTTCGTGGCCCGAA
CTGTTACCACTAG

Protein sequence :
MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDADLTKALYHSKKASRDKVM
PDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTG
EVREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMKQYGASRKALFDKLDKPALKP
LPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSN
HQHQKWSPGRLLNWGANIGPATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
KNNREGQLSKDKASTPNLVHSNVRGPNCYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 0.0 97
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-96 47
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 1e-96 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 1e-96 47