Gene Information

Name : VIBHAR_06001 (VIBHAR_06001)
Accession : YP_001448121.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 1188547 - 1188822 bp
Length : 276 bp
Strand : +
Note : COG: COG3677 Transposase and inactivated derivatives; Psort location: nuclear, score: 23

DNA sequence : 
ATGGCTACTATCCAAGTCCAATGTCGTTTCTGTAATAAAACTGAGTCCGTCCGTAAACACGGAAAGGGGCATTCTGGCTT
TCCTCGTTTCAGATGTATCGAGTGTCGAAAGAGCTTTCAACTTGATTACGTTTACGAAGCTCGCAAGCCAAATGTAAAAG
AAAAAATTGTCGATATGGCAATGAATAGCTCTGGCGTTAGGGAAACAGCAGGAGTGTTGAATGTCGCATACAACACTGTG
TTGAGCACTTTAAAAAACTCTCGCCAAGGCAAGTGA

Protein sequence : 
MATIQVQCRFCNKTESVRKHGKGHSGFPRFRCIECRKSFQLDYVYEARKPNVKEKIVDMAMNSSGVRETAGVLNVAYNTV
LSTLKNSRQGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 2e-09 50
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 1e-09 50
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 1e-17 46
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 2e-17 44
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 2e-17 44
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 4e-17 43
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 1e-16 41
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 2e-16 41
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 1e-16 41
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 2e-16 41
insA AEZ06026.1 InsA Not tested AbaR24 Protein 1e-16 41
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 2e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_06001 YP_001448121.1 hypothetical protein VFG1690 Protein 6e-10 50