Gene Information

Name : VIBHAR_05963 (VIBHAR_05963)
Accession : YP_001448083.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 1150116 - 1153175 bp
Length : 3060 bp
Strand : -
Note : KEGG: eci:UTI89_C2351 1.5e-63 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: plasma membrane, score: 23

DNA sequence :
ATGAGCATTGCTGAATACTCAATTAAGAACAAAGTCATCAGTTGGCTGTTCATCGTTATTCTAGCGATCGGCGGCGTGAC
GTCGTTCCTAGAACTAGGTCGATTAGAAGACCCGGCCTTTACTATCAAAGATGCGATGGTGATTGCAACCTACCCAGGTG
CAACGTCTAAAGAAGTAGAAGAAGAGCTGACGTATCCGCTTGAGAAAGAGATTCGTAAGCTACCTTACATTGATAAGATT
ACATCGACGTCTTCGAGTGGTATGTCGCAGATTATGGTGAGCATGAAGATGGACTACGGTCCGGATGAATTGCCGCAAAT
CTGGGATGAAATGCGCCGAAAAATCAACGATCTGCAACCAACTTTGCCGCAAGGCGTTCAATCTCTGCAAATCATTGATG
ACTTTGGTGACGTATACGGCGTAATGCTGATGCTAACGGGTGACGACTACGATTACGTAGAACTGAAACGTTACGCAGAC
CAACTCACACGTGAGCTCGAACTGATCGATGGCGTGGGTAAAGTTGATATCGCTGGTGACCAACAAGAGATGCTGTTTGT
TGAGATTTCATTGGATCGCTTGGCGGCTTTGAACCTCGACATGAACGTGATTTCTGGCTTGTTGAATCAACAGAACAATG
TGGTTTCTGCAGGTGAGGTAATGGTAAACGGCGAGAGCCTTATTATTCGCCCAAGCGGTACATTAAACACGGTTGAAGCA
CTAGAGAACCTAATTATTCACGGTCGCGATACGGGTAACCTGATTCGCCTAAAAGATGTTGCAACCATCAGCCGTGGCAT
TCAAGAACAACCGGGCAATGTGCTGCTATACAATGGTAAGAAAGCCATCAACATCGGTATTTCGTTTGCGTCTGGCGTAA
ACGTGGTAGAAGTCGGTCAACGTATTGACGCGGAACTAGCAAGCCTTGAGACCATCAAGCCAGCTGGTATCGATATGAAC
TACTTCTACAACCAATCGCAAGAAGTAGACGATTCAGTTAAAGCGTTTGTTATTAGCTTGGCAGAAGCGGTTGCTATCGT
AATCATCGTACTGCTGTTTACCATGGGCTTACGCAGTGGTGTGATCATTGGCTTGGTGCTGTTGTTGACGGTATTCGGTA
CCTTCATCTTGATGAACTACAACAACATTGAACTACACCGTATCTCACTTGGCGCGCTGATCATTGCACTCGGTATGCTG
GTGGACAACGCCATCGTGGTGGTCGAGGGGATATTGGTGGGTCTGAAGAAAGGACGAACCAAAGTTCAAGCCGCTACAGA
CATTGTTAGACAAACACAGTGGCCGCTGCTTGGTGCGACCGTCATTGCTATTACCGCGTTTGCGCCTATCGGTCTGTCAC
AAGATGCGACTGGTGAGTTCATGGGCTCGCTGTTCTGGGTTCTATGTTTCTCACTATTCTTGAGCTGGATTACCGCGATT
ACGCTAACGCCATTCCTTGCGGATCTTTTATTGAAAGAAGAAGACAAGAGTTCGGATGCAGAAGACGAAGACCCGTACAA
AGGTTGGTTGTTCGTCGCGTTTGGTGCGTCTCTTAAACTTGCGCTTCGTTTCCGTTGGTTAACAGTAACGGGCATGGTCG
CGCTGTTAGTTGGTGCCGTGGTTGCGTTTGGTAGTGTGAAGCAACAGTTCTTCCCGCCGTCAAACACGCCGATGTTCTAC
GTTGATATGTGGATGCCAGAAGGCACAGACATTCGCGAGACTATTAAGAAAGCAGAAGAAGTAGAAAGCTACATTCGTAC
ACAAGATGATGTCGATTTTGTTTCAGCTTCGATTGGTCAAGGTTTGCAGCGTTTCGCTCTGACTTACCAACCAGAGAAAA
GCTACGAAGCGTACGCACAGTTCCAAGTTCGCACGACAGACCGTGAGAAAATGTTTAAGCTGCTGTACAAGTTGGATGAC
AGCCTAGCGAAGACGTTCGACAAACCAACGTTTCAGTTCAAGTTGATGGAATTCGGCCCGTCTCCAGCGTCTAAGATTGA
AGCGCGTATTACTGGTCCAGATCCACAAGTGCTGCGTGACTTAGCAGTGCAGGTCGAAGACATTCTGCATACTGATCCGG
GAGCTCGTAATATCCGTCATGACTGGCGTGAGCGCACTAAAGAGTTAGTGCCTGTATTTAACGAGTCTAAAGCGCGCCGC
TTAGGTATCTCGAAAGAAGATCTTTCAAGCACACTACAAATGGCGTTTGGTGGTAGCACACTGGGCTTCCTTCGCGATGG
TACGCATATTCTGCCTATCATGACGCGTCTGCCAGAAGCGGAACGTGTGGATTTTGAATCACTGCAGAACGTGAACATCT
GGAGTCCCTCACTGCAAAGCTACATTCCAGTTGATCAAGTGATTGATGGAGTGAAACTGGATTGGGATGAGCCATTGATT
CAGCGTCGTGACCGTAAACGTACTCTAACGGTACTGGCTGACCACGATGTATTGAGTGATGACACTGCAGCAAGCCTGTT
TGCTCGTGTTCAACCAAAAGTGATGGCGCTGCATATCCCAGAAGGTTATGAAATCACGTGGGGTGGTGAGTACGAATCAT
CGAAAGACGCACAAGAAGGTCTGTTTGGCTCACTGCCAATGGGTTACCTGTTGATGTTCATCATTACGATGCTGCTGTTT
AACTCACTGAAGAAACCACTGGTTATTTGGTTCACCGTTCCGTTGTCTATCATCGGTGTGTCGTTTGGTTTGTTAACCAC
GAATATGCCATTCAGCTTTACCGCGTTCCTTGGTCTATTGAGTTTGAGCGGTATGATTCTGAAAAACGGTATCGTACTTC
TTGATCAGATTAACCTAGAGCTGGCATCAGGTAAGGATCCTTACTTAGCGATTGTCGACAGTGCGATCAGCCGTGTTCGA
CCAGTAAGTATGGCGGCACTGACCACCATCCTAGGTATGATTCCACTGGTGTTTGATGCGTTCTTCGGCTCAATGGCGAT
TACGATTATGGCAGGCCTTGGTTTTGCTACAGTTTTGACTTTGATTGTTGTACCAGTCATGTTTGCAATTCTGTTTAAGA
TCAAACCAACCACTGCATAA

Protein sequence :
MSIAEYSIKNKVISWLFIVILAIGGVTSFLELGRLEDPAFTIKDAMVIATYPGATSKEVEEELTYPLEKEIRKLPYIDKI
TSTSSSGMSQIMVSMKMDYGPDELPQIWDEMRRKINDLQPTLPQGVQSLQIIDDFGDVYGVMLMLTGDDYDYVELKRYAD
QLTRELELIDGVGKVDIAGDQQEMLFVEISLDRLAALNLDMNVISGLLNQQNNVVSAGEVMVNGESLIIRPSGTLNTVEA
LENLIIHGRDTGNLIRLKDVATISRGIQEQPGNVLLYNGKKAINIGISFASGVNVVEVGQRIDAELASLETIKPAGIDMN
YFYNQSQEVDDSVKAFVISLAEAVAIVIIVLLFTMGLRSGVIIGLVLLLTVFGTFILMNYNNIELHRISLGALIIALGML
VDNAIVVVEGILVGLKKGRTKVQAATDIVRQTQWPLLGATVIAITAFAPIGLSQDATGEFMGSLFWVLCFSLFLSWITAI
TLTPFLADLLLKEEDKSSDAEDEDPYKGWLFVAFGASLKLALRFRWLTVTGMVALLVGAVVAFGSVKQQFFPPSNTPMFY
VDMWMPEGTDIRETIKKAEEVESYIRTQDDVDFVSASIGQGLQRFALTYQPEKSYEAYAQFQVRTTDREKMFKLLYKLDD
SLAKTFDKPTFQFKLMEFGPSPASKIEARITGPDPQVLRDLAVQVEDILHTDPGARNIRHDWRERTKELVPVFNESKARR
LGISKEDLSSTLQMAFGGSTLGFLRDGTHILPIMTRLPEAERVDFESLQNVNIWSPSLQSYIPVDQVIDGVKLDWDEPLI
QRRDRKRTLTVLADHDVLSDDTAASLFARVQPKVMALHIPEGYEITWGGEYESSKDAQEGLFGSLPMGYLLMFIITMLLF
NSLKKPLVIWFTVPLSIIGVSFGLLTTNMPFSFTAFLGLLSLSGMILKNGIVLLDQINLELASGKDPYLAIVDSAISRVR
PVSMAALTTILGMIPLVFDAFFGSMAITIMAGLGFATVLTLIVVPVMFAILFKIKPTTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_05963 YP_001448083.1 hypothetical protein BAC0526 Protein 0.0 94
VIBHAR_05963 YP_001448083.1 hypothetical protein BAC0428 Protein 0.0 58
VIBHAR_05963 YP_001448083.1 hypothetical protein BAC0519 Protein 0.0 57
VIBHAR_05963 YP_001448083.1 hypothetical protein BAC0425 Protein 0.0 41