Gene Information

Name : VIBHAR_05802 (VIBHAR_05802)
Accession : YP_001447922.1
Strain :
Genome accession: NC_009784
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 989311 - 990012 bp
Length : 702 bp
Strand : -
Note : KEGG: pen:PSEEN1885 5.5e-60 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGCAAACACCTGTACTTAACGCACCTATTGTCCAAGCGAATTTGGTTTCTAAACAAGTCTCTACTAATCAAGAACAATT
AACAATCCTTAAAAATGTAAATGTTGACATTAGAAAGGGTGAAAGAATTGCCATCGTCGGCACATCTGGCGCGGGCAAAT
CTACGCTAATGACACTTCTTGCCGGTTTGGACACACCAACGTCGGGTGAGATTACGTTGCTCGGTCATGAACTCTCCAAA
ATGGACGACGAAGAACGTGCAAAGATTCGCGCTGACTCGTTGGGCTTTGTATTTCAGAGCTTCCTTCTTATCCCGAGCCT
AACTGCTCTGCGCAACGTAACGCTGCCTTGTCTTTTACGTGGTGAGGCTGAAGATGATTCAAGGGCAAAGGATTTGCTGA
CTGCGGTAGGCCTAGAAAGACGCTTAGACCATTTACCAAGTCAGCTATCTGGGGGTGAACAACAAAGGGTTGCGCTTGCT
CGTGCTTTCATGACTCAGCCAGAGCTACTGTTTGCAGACGAGCCAACAGGGAATTTGGACCACCAAACCGCCGAGAAAGT
CATTGAGCTGCTTTTTGACTTGAACGAACAGCACGGTACGACCTTAATCTTAGTCACGCATGACAGCCTCTTAGCCAGCC
GTTGTGATCGAGTGTATCGAATGGAAGCCGGAGAATTGAAAGAGGAGGTGACATGTCCGTGA

Protein sequence : 
MQTPVLNAPIVQANLVSKQVSTNQEQLTILKNVNVDIRKGERIAIVGTSGAGKSTLMTLLAGLDTPTSGEITLLGHELSK
MDDEERAKIRADSLGFVFQSFLLIPSLTALRNVTLPCLLRGEAEDDSRAKDLLTAVGLERRLDHLPSQLSGGEQQRVALA
RAFMTQPELLFADEPTGNLDHQTAEKVIELLFDLNEQHGTTLILVTHDSLLASRCDRVYRMEAGELKEEVTCP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_05802 YP_001447922.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-37 48
VIBHAR_05802 YP_001447922.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-39 46
VIBHAR_05802 YP_001447922.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-37 43
VIBHAR_05802 YP_001447922.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-36 41