Gene Information

Name : VIBHAR_00706 (VIBHAR_00706)
Accession : YP_001443935.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 697668 - 698834 bp
Length : 1167 bp
Strand : +
Note : KEGG: vpa:VP0236 3.1e-192 nucleotide sugar dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGAAAATTGCTGTTGCTGGTACCGGTTATGTTGGGCTTTCCAACGCAATGTTGTTAGCTCAAAACCACGAAGTGGTTGC
ACTAGATATCGTTCCTGAAAAGGTTGAATTGCTTAACAAACAACAATCTCCAATTGTTGATGCTGAGATTGAGCATTTCC
TTGAAAACAGGGAACTTAACTTCATCGCAACAACCGATAAGCAGAAAGCTTATAAAGGTGCAGAGTACGTTGTGATCGCA
ACACCAACGGATTATGACTCAGTCACGCATTACTTCAATACTTCTTCTGTTGAAGCGGTGATTAAAGATGTTATGTCTAT
CAATCCTAATGCAGTAATGGTGATTAAGTCTACTGTCCCTGTGGGTTACACGGCTCGCATCAAAGAAGAATTGGGGTGTG
AGAATGTCATCTTTTCTCCAGAGTTCCTGCGTGAGGGCAAAGCGCTTTACGATAACCTTCACCCATCACGTATCATTGTT
GGTGAGCGTAGTGAACGTGCCGAAGTGTTTGCTGGCTTGCTGGTGGAAGGGGCAGTAAAAGACGATATTCAAGTTCTATT
TACTGATTCGACAGAAGCTGAAGCAGTAAAACTATTTTCAAACACCTACCTTGCTATGCGTGTCGCGTACTTCAATGAGC
TAGATTCTTACGCAGAAGCTCATGGCTTGGACGCTCGTCAAATCATTGAAGGTGTTGGCTTAGATCCTCGTATAGGTAAT
CATTACAACAACCCATCATTTGGTTACGGTGGTTACTGCTTACCAAAAGACACTAAACAGCTTTTAGCCAATTACCAAGA
TGTACCAAACAACATCATTGGTGCGATTGTTGATGCTAACCGTACTCGTAAAGACTTTGTGGCTGAAGCTATTCTTAAGC
GCGAACCAAAAGTTGTCGGTATTTACCGCTTAATCATGAAGGCGGGATCGGATAACTTCCGTGCTTCTTCTATTCAAGGC
ATCATGAAGCGTATCAAGGCGAAAGGTGTTGAGGTCGTAGTTTACGAACCAGTGCTCAAAGAAGAAGATTTCTTTAACTC
GCGCGTGATTGAAGACCTTAATGAGTTTAAGCAAACGGCAGATGTGATCGTCTCTAACCGTATGGTTGAAGAGTTGGCAG
ACGTTGCTGATAAAGTTTACACGCGTGATTTATTTGGTAGCGACTAG

Protein sequence : 
MKIAVAGTGYVGLSNAMLLAQNHEVVALDIVPEKVELLNKQQSPIVDAEIEHFLENRELNFIATTDKQKAYKGAEYVVIA
TPTDYDSVTHYFNTSSVEAVIKDVMSINPNAVMVIKSTVPVGYTARIKEELGCENVIFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFAGLLVEGAVKDDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAEAHGLDARQIIEGVGLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQDVPNNIIGAIVDANRTRKDFVAEAILKREPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGVEVVVYEPVLKEEDFFNSRVIEDLNEFKQTADVIVSNRMVEELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-93 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_00706 YP_001443935.1 nucleotide sugar dehydrogenase VFG0963 Protein 3e-99 53