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Name : VIBHAR_00603 (VIBHAR_00603) Accession : YP_001443832.1 Strain : Genome accession: NC_009783 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 589933 - 591153 bp Length : 1221 bp Strand : + Note : COG: COG1459 Type II secretory pathway, component PulF; Psort location: endoplasmic reticulum, score: 9 DNA sequence : ATGGCAGCATTTGAATACAAAGCGCTAGACGCGAAAGGCAAACAGAAGAAAGGCACCATTGAAGGGGATAACGCTCGTCA GGTGCGCCAACGCCTAAAAGAACAGGGTATGATTCCTGTCGAGGTGATGGAAGCCAAAGCGAAAGCCGCTAAGTCTTCAG GCGGGTCAGTTGGGTTCAAGCGAGGCATCAAAACCGCAGAGCTTGCGTTGATTACGCGTCAGCTTTCGACCTTGGTTCAA TCGGGGATGCCACTTGAAGAATGTTTGAAGGCCGTTTCGGAGCAAGCAGAAAAGCCACGTATTCGTTCGATGATTGCCGC GGTGCGCTCAAAAGTCACTGAGGGTTACCCTCTGGCCGACAGTTTGGGTGACTACCCACATGTTTTCGATGAGCTTTACC TTTCGATGGTGGCAGCGGGTGAAAAATCGGGTCACTTGGATACAGTACTAGAACGCTTGGCTGATTATGTAGAAAACCGC CAAAAGATGCGTTCTAAGTTGCTGCAAGCCATGATTTACCCAGTGGTATTGGTGGTGTTTGCTGTTGGTATCGTCTCTCT GTTGCTGTCTTCTGTCGTACCTAAAATCATTGAACCCATTATTCAAATGGGACAAGAGTTGCCTCAATCAACGCAATTCT TGCTGTCTGCGAGTGAGTTTGTCCAAGAATGGGGGCTTATCATCTTTGTCGTGGTGGTGGTGTTCTTCTATGGCCTTAAA CTCGCGTTACAGAAACCAAATTTTCGCTTGGCTTGGGATCAAAAAATTCTCAGCCTACCGTTGATTGGTAAGATTTCTCG CGGTCTGAATACCTCACGATTTGCTCGCACCTTGTCGATTTGTACCTCAAGTGCGATTCCTATTCTTGAAGGGATGCGAG TCGCGGTCGACGTTATGTCGAACCGTTATGTAAAACAACAGGTCTTAGTTGCGGCAGACAACGTGCGAGAAGGTGCAAGT CTGCGCAAAGCCCTTGATCAAACTCGCTTGTTCCCACCAATGATGCTACACATGATTTCAAGTGGTGAGCAAAGTGGTGA GCTTGAAAGTATGTTGACGCGAGCGGCGGACAACCAAGACCAAAACTTTGAATCGACGGTCAACATTGCACTTGGCATTT TTACTCCAGTATTGATTGCCCTGATGGCGGGCTTGGTACTTTTCATCGTAATGGCGACATTGATGCCAATGTTGGAAATG AATAACTTGATGAGCGGATAA Protein sequence : MAAFEYKALDAKGKQKKGTIEGDNARQVRQRLKEQGMIPVEVMEAKAKAAKSSGGSVGFKRGIKTAELALITRQLSTLVQ SGMPLEECLKAVSEQAEKPRIRSMIAAVRSKVTEGYPLADSLGDYPHVFDELYLSMVAAGEKSGHLDTVLERLADYVENR QKMRSKLLQAMIYPVVLVVFAVGIVSLLLSSVVPKIIEPIIQMGQELPQSTQFLLSASEFVQEWGLIIFVVVVVFFYGLK LALQKPNFRLAWDQKILSLPLIGKISRGLNTSRFARTLSICTSSAIPILEGMRVAVDVMSNRYVKQQVLVAADNVREGAS LRKALDQTRLFPPMMLHMISSGEQSGELESMLTRAADNQDQNFESTVNIALGIFTPVLIALMAGLVLFIVMATLMPMLEM NNLMSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-97 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-96 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VIBHAR_00603 | YP_001443832.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-92 | 52 |
| VIBHAR_00603 | YP_001443832.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-88 | 47 |
| VIBHAR_00603 | YP_001443832.1 | general secretion pathway protein F | VFG1870 | Protein | 4e-76 | 41 |
