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Name : VIBHAR_00602 (VIBHAR_00602) Accession : YP_001443831.1 Strain : Genome accession: NC_009783 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 588428 - 589933 bp Length : 1506 bp Strand : + Note : KEGG: pen:PSEEN2333 9.9e-125 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: cytoplasmic, score: 23 DNA sequence : ATGATGGTTGATATGTTAGACACAGCGCCAAGCATGCGCCGTCTGCCATTCAGTTTTGCCAACCGCTTTAAACTGGTATT GGAGACGGAGCACCCTGAGCGCCCTCCAATCTTGTATTACGTCGAGCCGCTCAATCCTGCGGCTTTGGTTGAAGTACGCC GTGTACTGAAACAAAACTTTATTCCTCAACCGATGGACAAAGAAGCGTTCGATAAAAAGCTAACTGAAGCTTATCAGCGC GACTCTTCTGAAGCTCGTCAGTTGATGGAAGACATTGGTGCAGACAGTGACGACTTTTTCTCATTGGCAGAAGAGCTGCC GCATGATGAGGACTTGCTAGAGTCTGAAGATGATGCGCCAATCATCAAATTGATCAATGCCATGCTCGGTGAAGCGATCA AAGAAGGGGCATCGGATATTCATATCGAAACGTTCGAGAAAACCCTGTCAATTCGTTTTCGTGTCGATGGTGTATTGCGT GAAGTCTTAACCCCAAGCCGTAAACTCGCCCCTTTGCTGGTTTCTCGTGTGAAGGTAATGGCAAAACTAGATATCGCAGA AAAACGTGTTCCTCAAGATGGCCGTATTTCTCTGCGTATCGGTGGTCGAGCAGTAGACGTTCGTGTTTCTACCATGCCTT CATCGCATGGTGAGCGTGTGGTAATGCGTCTATTGGACAAAAACGCAACGCGTCTAGATTTACACAGTTTGGGTATGACG CCATCGGTGCACGATAACTTTGGTCGCTTGATTCAACGTCCACACGGTATCATCTTGGTGACTGGTCCGACAGGTTCGGG TAAGTCAACGACCTTGTACGCGGGCTTGCAAGAGATCAACAGCAACGAACGTAATATTCTGACGGTAGAAGACCCAATCG AATTCGATATCGATGGTATCGGCCAAACACAGGTAAACCCTAAGGTTGATATGACCTTTGCGCGAGGTCTGCGTGCGATT CTTCGTCAAGACCCGGATGTAGTGATGGTCGGTGAGATCCGTGACTTAGAGACAGCACAGATTGCGGTGCAAGCCTCTTT GACTGGTCACTTGGTTATGTCGACACTACACACCAACACGGCTGTGGGTGCGATTACTCGTCTGCGTGACATGGGTATTG AACCCTTCCTGATCTCTTCTTCGCTATTGGGCGTGTTAGCACAGCGCCTAGTTCGAACCCTTTGTTCTGACTGTAAAGAG CCATACGAAGCGGATAAAGAACAGAAGAAATTGTTCGGTCTGGAAGAGCACGAATCGCTGGTTCTGCATCGAGCAAAAGG GTGTGAAGTATGTAACCAAAAAGGTTACCGCGGTCGTACTGGTATTCACGAACTTCTAATGGTGGATGAGAAAGTTCAAG AACTGATTCACAGCGAAGCGGGTGAGCAAGAAATTGAGAAAACCGTACGCCAGCATACGCCAAGTATTCGTAGCGACGGC CTGAGTAAAGTCAGCCGTGGTATCACTTCTCTTGAAGAAGTCATGCGAGTGACCAAGGAAGCTTAA Protein sequence : MMVDMLDTAPSMRRLPFSFANRFKLVLETEHPERPPILYYVEPLNPAALVEVRRVLKQNFIPQPMDKEAFDKKLTEAYQR DSSEARQLMEDIGADSDDFFSLAEELPHDEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLR EVLTPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMT PSVHDNFGRLIQRPHGIILVTGPTGSGKSTTLYAGLQEINSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAI LRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCSDCKE PYEADKEQKKLFGLEEHESLVLHRAKGCEVCNQKGYRGRTGIHELLMVDEKVQELIHSEAGEQEIEKTVRQHTPSIRSDG LSKVSRGITSLEEVMRVTKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-163 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-163 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-161 | 66 |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-144 | 63 |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG1876 | Protein | 5e-130 | 58 |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG0233 | Protein | 1e-83 | 47 |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-87 | 46 |
| VIBHAR_00602 | YP_001443831.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-76 | 45 |
