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Name : VIBHAR_00601 (VIBHAR_00601) Accession : YP_001443830.1 Strain : Genome accession: NC_009783 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 586462 - 588438 bp Length : 1977 bp Strand : + Note : COG: COG1450 Type II secretory pathway, component PulD; Psort location: cytoplasmic, score: 23 DNA sequence : ATGGCGAACGAGTTTAGTGCCAGCTTCAAAGGCACTGATATTCAAGAATTCATCAATATTGTTGGTCGCAATCTAGAGAA GACCATCATCGTTGACCCGTCTGTGCGCGGTAAGATTGACGTACGTAGTTACGACGTTCTTAACGAAAAGCAGTACTACA GCTTCTTCTTGAACGTTCTTGAAGTGTATGGTTATGCCGTTGTCGAAATGGACAATGGTGTGTTGAAAGTCATCAAAGCG AAAGATTCAAAAACGTCAGCAATCCCGGTTTTGGGTGATGACAGTGCGCAAGGCGACAGCGTGATTACCCGTGTGGTTGC GGTGCGTAATGTGTCGGTTCGTGAACTTTCTCCGCTACTGCGTCAACTGATTGATAACGCAGGTGCCGGTAACGTGGTGC ACTACGATCCAGCTAACATCATCTTGATCACGGGTCGTGCTGCGGTAGTAAACCGCCTAGCGGAAATCATTAAGCGCGTT GACCAAGCGGGTGACAAAGAAATCGAAGTCGTAGAGCTGCGCAATGCGTCTGCTTCTGAGATGGTGCGTATCGTTGATGC CCTGAACAAAACGACCAACCAAAAGAGCACACCTGAATTCCTAGAGCCAAAAATCGTAGCGGATGATCGTACTAACTCCA TCCTGATTTCTGGTGATCCTAAAGTTCGTGCGCGCCTGAAGCGTTTGATTCGTCAACTTGACGTTGAAATGGCGACCAAA GGCAATAACCGCGTGGTTTACCTAAAGTACGCGAAAGCGGAAGACCTAGTTGATGTACTAAAAGGCGTATCTGACAACTT ACAGGCTGAGAAGCAAGCAGGTCAAAACGGCGCATCAAGTGCACAGCGTGGTGAAGTGGTGATTGCCGCTCACGAAGCAA CCAACTCGCTCGTTTTGACTGCGCAGCCAGATATCATGATGGCGCTACAAGACGTGATTTCTCAACTGGATATCCGTCGT GCACAAGTTCTGATTGAAGCGTTGATCGTTGAAATGTCTGAAGGCGACGGCATCAACCTTGGCGTTCAATGGGGTAACTT AGATACAGGTGCGGTAATCCAATACGGCAACACTGGCGCACAAATCGGTAATGTCATGGTTGGTCTTGAAGAAGCGAAAG ATACAACGAAGACTGAGAGCTATTGGGATGAAGATGCTAATGGCGGAAGTGGTGATTGGAATACTCGTGAATATATCGAA GAAGGTGATTACTCGACACTAGCCGCTGCACTTGGTGGTGTTAATGGTGCAGCAATGAGCATCATGATGGGTGACTGGAC TGCATTGATTACTGCTGTGTCATCGGATTCAAACTCAAACATCCTATCTTCTCCAAGCATTACAGTGATGGATAATGGCG AAGCGTCCTTCATCGTTGGTGAAGAAGTGCCTGTGATTACAGGCTCGACATCCGGGTCGAATAACGACAACCCATTCCAA ACGGTTGACCGTAAAGAAGTCGGTATCAAACTTAAAGTTGTGCCTCAAATCAACGAAGGTGACTCAGTACAACTGACTAT TGAGCAGGAAGTGTCAAACGTTCTGGGTGCAAATGGTGCGGTGGACGTGCGTTTCGCGAAGCGTCAGTTGAATACCTCTG TGATGATTCAAGATGGTCAGATGCTAGTTCTGGGCGGTTTGGTTGATGAGCGTGCGTTAGAAAGTGAATCGAAAGTGCCG CTACTGGGTGATATTCCTGTCATTGGTCAACTGTTCAAGTCGACTAGCACGCAAACAGAAAAACGTAACCTGATGGTGTT TATCAAGCCAACCATCATCCGCGATGGTATGACGGCTGATGGTATCACTCAGCGTAAGTACAACTTCATTCGTGCAGAGC AGCTTTATAAAGCGCAAGAAGGCTTGAAGCTGATGGATGATTCAAAAGTTCCACTAATGCCTGAATTTGGTGAAGAGCGT AAACACCCTGCTGAAATTCAAGCGTTCATCGATCAGATGGTAAAGAATGATGGTTGA Protein sequence : MANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEKQYYSFFLNVLEVYGYAVVEMDNGVLKVIKA KDSKTSAIPVLGDDSAQGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIKRV DQAGDKEIEVVELRNASASEMVRIVDALNKTTNQKSTPEFLEPKIVADDRTNSILISGDPKVRARLKRLIRQLDVEMATK GNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQNGASSAQRGEVVIAAHEATNSLVLTAQPDIMMALQDVISQLDIRR AQVLIEALIVEMSEGDGINLGVQWGNLDTGAVIQYGNTGAQIGNVMVGLEEAKDTTKTESYWDEDANGGSGDWNTREYIE EGDYSTLAAALGGVNGAAMSIMMGDWTALITAVSSDSNSNILSSPSITVMDNGEASFIVGEEVPVITGSTSGSNNDNPFQ TVDRKEVGIKLKVVPQINEGDSVQLTIEQEVSNVLGANGAVDVRFAKRQLNTSVMIQDGQMLVLGGLVDERALESESKVP LLGDIPVIGQLFKSTSTQTEKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAQEGLKLMDDSKVPLMPEFGEER KHPAEIQAFIDQMVKNDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-156 | 54 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 6e-164 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VIBHAR_00601 | YP_001443830.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-152 | 53 |
