Gene Information

Name : VIBHAR_03608 (VIBHAR_03608)
Accession : YP_001446757.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3643972 - 3645408 bp
Length : 1437 bp
Strand : -
Note : KEGG: vpa:VP2630 9.6e-214 succinate-semialdehyde dehydrogenase K00135; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGATGCAGCAGATACAAAGTGAAACGCTAAGAGTCTTATTCGAAAACCTTTCTTCTCAAGATGGGATTGCCGTTATTAA
TCCTACGACTGAGCAAGAACTGATTCGCTTAAAGCCTAGCTCTTTGGATGAGTTAGACGTGCAAATAGAAGCGTGTAAAT
CGGCTCAGCTCGAGTGGGCAAAACTCAGCGCTAAAGCACGCTCCGCTTCCTTGAAAAAGTGGTTCCAATTGCTTGTAGAG
CATACGGAAGACATCGCGAACATCATTACCTTAGAACAAGGTAAACCCCTTACTGAAAGTCGTGGAGAAGTCGCATACGG
CGCATCTTTTGTTGAATGGTTCGCAGAGGAGGCTAAGCGTGCCTATGGAGAGGTTATTCCTGCTCCTACTATAGATAGAC
GCCTCTCTACCATCAAACAGCCTGTTGGTGTGTGTGCGGCGATTACACCATGGAACTTCCCTATTGCAATGATCACTCGA
AAAGCGGCGCCTGCTTTGGCTGCGGGGTGTGGGATGATCATTAAACCTTCTGAATTAACGCCTTTGACTACTTTGGCCGT
GGTGGAGCTTGCTCATCAGGCTGGTATTCCTAAAGCTCTATTGTCTACAGTTGTTTCTGAACAAGCCGCAGAGTTTGGTT
TGGTATTAAGTACCGATCCGCGTATTAAGAAGATCTCTTTCACTGGTTCGACACGTGTCGGCAAGATCTTGATGAAGCAG
GCAAGTGATACGGTTAAAGCCGCTTCTATGGAATTGGGTGGCAATGCGCCTTTTATTGTTTTTGAGGATGCAGACTTAGA
AGCAGCAGCTAATGGTTTGATTGCGTCTAAGTTCCGTAATGCCGGACAAACCTGTGTGTGTACCAACCGCTTGTATGTGC
ATAAGAGCGTAAAAGAGGCTTTCTTAGCTAAGCTTCTGGAAAAAGCGGCAGGCCTGACTGTCGGTAATGGTCTTGAGGAA
AATACAACTCTTGGTCCTGTGATTACAATGGCTTCTAAGCATCGCCTAGAGGCAGTGATCGATCAGGCAGTACAAGAAGG
GGCGACAATGCTTAACCAGCCTCAAAAACGATCTGGGCGCTTTATGGAGCCTGTTATCTTAGATAATGTGGAACAGAATA
TGGCGATCGTGCAACAAGAGCTGTTTGGCCCGGTTCTGCCAGTCATTAGTTTTGATGACGATGAACAAGTGCTCTCGATG
GCGAATGACACTGAATATGGTTTAGCTTGCTACTTCTACACCGATAGCTTGAAGCGCATCATCAAATTTAGTGAAGGTTT
GGAATACGGCATGGTAGGGGTAAACGAAGGGATTATCTCTACAGAAGTAGCGCCATTTGGTGGGATCAAAGAATCTGGCA
TTGGTCGTGAAGGGGCTAAGCAAGGCATGGATGAGTATCTAGAGACGAAGTACATCTGCCTTGGCGGTTTGAGCTAG

Protein sequence :
MMQQIQSETLRVLFENLSSQDGIAVINPTTEQELIRLKPSSLDELDVQIEACKSAQLEWAKLSAKARSASLKKWFQLLVE
HTEDIANIITLEQGKPLTESRGEVAYGASFVEWFAEEAKRAYGEVIPAPTIDRRLSTIKQPVGVCAAITPWNFPIAMITR
KAAPALAAGCGMIIKPSELTPLTTLAVVELAHQAGIPKALLSTVVSEQAAEFGLVLSTDPRIKKISFTGSTRVGKILMKQ
ASDTVKAASMELGGNAPFIVFEDADLEAAANGLIASKFRNAGQTCVCTNRLYVHKSVKEAFLAKLLEKAAGLTVGNGLEE
NTTLGPVITMASKHRLEAVIDQAVQEGATMLNQPQKRSGRFMEPVILDNVEQNMAIVQQELFGPVLPVISFDDDEQVLSM
ANDTEYGLACYFYTDSLKRIIKFSEGLEYGMVGVNEGIISTEVAPFGGIKESGIGREGAKQGMDEYLETKYICLGGLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-109 50