Gene Information

Name : hemC (VIBHAR_00314)
Accession : YP_001443569.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 302934 - 303872 bp
Length : 939 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGACACAATCTACGCCAATTCGCATTGCAACTCGAAAAAGCCCTCTTGCCCTATGGCAAGCACACTTTGTAAAAGACGC
ACTTCAAGCCGCTCATCCAGGTTTGGAAGTAGAACTCGTCACTATGGTGACCAAAGGCGACATCATTTTGGATACGCCGC
TAGCCAAAGTTGGTGGTAAAGGCTTGTTCGTTAAAGAGCTAGAAGTGGCAATGCTTGAAGGTCGTGCAGACCTTGCGGTG
CACTCAATGAAAGATGTACCAGTAGACTTCCCTGAAGGTCTTGGCTTGGTGACGATTTGTGAGCGTGAAGACCCACGCGA
TGCCTTCGTATCTAACACTTACAACAACATTGATGAGCTGCCACAAGGCGCAGTTGTAGGTACTTGTAGCCTGCGTCGTC
AGTGTCAGTTAAAAGAATACCGCCCAGACTTAGTTATCAAAGAGCTGCGTGGCAACGTAGGTACTCGCCTAGGTAAGCTA
GATGCAGGTGAATACGACGCAATCATTCTTGCAGCAGCAGGCCTGAAGCGCCTTGAGCTAGAAGAGCGCATCCGTAGCTT
TATCGAGCCAGAGCAATCACTGCCAGCAGTAGGCCAAGGTGCGGTGGGTATTGAGTGTCGTGTGGATGACGAGCGTCTAC
TTAAGTTGCTTGAGCCACTAAACCACCAAGATACAGCAGATCGCGTACGCTGTGAGCGTGCGATGAACCTCACCCTTGAA
GGCGGTTGTCAGGTGCCAATCGGCAGTTACTCACTGCTTGATGGCGATAACATCTGGCTTCGCGCACTAGTTGGTGAACC
AGACGGCAGCCTAATTGTGCGTGGTGAAATTCGTGGTCACCGCAACGATGCCGAAGCACTCGGTGTTCAACTGGCTAATG
AGCTACTTGAAAACGGTGCGCGCGACATCCTAACCAAACTGTACGCAGACCACGAATAA

Protein sequence : 
MTQSTPIRIATRKSPLALWQAHFVKDALQAAHPGLEVELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAV
HSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKL
DAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE
GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGARDILTKLYADHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-86 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-86 63