Gene Information

Name : VIBHAR_02834 (VIBHAR_02834)
Accession : YP_001446014.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2854736 - 2855455 bp
Length : 720 bp
Strand : -
Note : KEGG: rru:Rru_A3236 1.3e-65 hypothetical protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: nuclear, score: 23

DNA sequence : 
GTGAATAACAAGAATTCTGGAGACAAGATGTCGAAAACGCCACTGGTTGATTTGACTAACATTTGTAAATACTACTCAAG
CGGAGAGGCGGAAGTACGTGCGCTAGATGGCGTCGACTTGACCATCAACCAAGGGGAATTTCTTTCCATTCTTGGCCCGT
CTGGCTCGGGGAAATCGACGCTGATGAACATGTTGGGCTGCTTAGATAAACCGACCGATGGCCAATACCAATTGGGTGGT
CAAAACGTCGCAAGTTTAAGCCCGAACGAACTAGCCGGTATTCGTAACCAAAAGATAGGCTTTGTCTTCCAAAGCTTTAA
CTTGTTGGAATACGCGACAGCATTGGATAATGTGGCACTGCCGTTGGTTTACTCTGGCATCAAAGCCAAAGAACGTCGCC
AGCGCGCAGCTAAATTGCTAGAGCAAGTCGGACTAGGAGATCGCCTCGACCACAAACCAAACCAGCTTTCTGGTGGTCAA
AAGCAAAGAGTGGCGATTGCGAGAGCCTTGGTCAACGATCCACAAATCATCTTAGCGGATGAACCAACGGGTGCGTTGGA
TTCAAAATCTGGCGCAGAGATTGAAGCCTTGTTCAATCAACTCCACGCTGAAGGCAGAACCTTGATCATCGTGACGCACG
ATAACGCTCTTGCAGAGCGCACTAAGCGCATCATCACCATCAAAGATGGCAAGGTGATTTCGGATAGAGTGCCGCAGTAA

Protein sequence : 
MNNKNSGDKMSKTPLVDLTNICKYYSSGEAEVRALDGVDLTINQGEFLSILGPSGSGKSTLMNMLGCLDKPTDGQYQLGG
QNVASLSPNELAGIRNQKIGFVFQSFNLLEYATALDNVALPLVYSGIKAKERRQRAAKLLEQVGLGDRLDHKPNQLSGGQ
KQRVAIARALVNDPQIILADEPTGALDSKSGAEIEALFNQLHAEGRTLIIVTHDNALAERTKRIITIKDGKVISDRVPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_02834 YP_001446014.1 hypothetical protein NC_012469.1.7686878. Protein 5e-58 55
VIBHAR_02834 YP_001446014.1 hypothetical protein NC_008702.1.4606598. Protein 7e-51 49
VIBHAR_02834 YP_001446014.1 hypothetical protein CP001581.1.gene598.p Protein 3e-41 44
VIBHAR_02834 YP_001446014.1 hypothetical protein CP001581.1.gene798.p Protein 1e-36 41