Gene Information

Name : VIBHAR_00182 (VIBHAR_00182)
Accession : YP_001443457.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 183481 - 185013 bp
Length : 1533 bp
Strand : +
Note : COG: COG4584 Transposase and inactivated derivatives; Psort location: nuclear, score: 23

DNA sequence :
ATGGCAAAAAAGAGAACTCCAATGAATAAAATCAAAGAGGTATTACGCCTTAAGTACGACTGCGGTCTCTCAAACCGCAG
CATCGCTTCCTGCCTTAAACTCGGCCCTTCCACCATATCGGAACTCCTGACTCGCTTTAAACAAAGCCAACTTGGCTGGC
CTCTGCCAGAAGGTTGCAGTGATGCAGACCTCACTAAGGCTCTGTATCACTCGAAGAAAGCCAGTCGCGACAAAGTCATG
CCAGACTTCACTCAATACGCTGTCGAACTCAGGCGTAAAGGCATGACGAAGATGCTGTTGTGGCAGGAATATCATGAGCA
ATATCAAGAGCAAGCTTACGCTTACACTCAGTTCTGCGAGCACTTCACTCGCTGGTTCAAAACCCAAAAACGCAGTATGC
GTCAGCTTCATGTTGCGGGAAATAAGCTGTTTATCGATTACTGTGGGCCTCGGCTTCAGGTGGTCAATCCTGACACAGGA
GAAGTGCGCGAAGCGGAGGTGTTCGTGGCGACCTTAGGTGCGTCCAATTACACCTATGTTGAAGCCTTCCCTAGCCAAGG
TAAGTCCTACTGGTTAGAGGCGCATGCTAATGCGTTCGAACACTTCGGCGGCGTACCACAACTCTTAGTTCCCGATAATC
TTCGCAGCGCGGTCACCAAAGCTAACCGTTATGAGCCAAGACTTAACGACAGCTATCAAAAGCTGGCGAACCACTATCAA
ACAGCAGTGATGCCAGCTCGCCCCTATAAACCGAAAGACAAAGCCAAAGCAGAGAATGCTGTGCTCCTGGTGGAACGCTG
GATCATGATGCGGCTGCGACACCAAACCTTCCATACCTTCAAAGAACTGAACCTAGCCATCCGTGAGCTTATGAATGACT
TAAACGAACGTAAGATGAAACAGTATGGTGCGAGTCGTAAAGCGCTGTTCGACAAGCTCGATAAACCCGCGTTAAAGCCT
CTGCCTAAGCAGCGTTACCTGTATACCGAAACCAAGCGAGCCAAAGTGGGGCCTGACTATCACATCGAATATCGCCGTCA
TTACTACTCGGTTCCCCATCAACTTGTTGGTCACCATGTCGAACTGGAAGCCTCTAACCGTCTGGTGCAGATCTACCATA
AAGGTAACTTGGTCGCCCAGCATCCACTCAGCCAAAGAGAACGTGGAAACAGCACCCAACCAGAGCATATGCCGAGTAAT
CATCAACATCAAAAGTGGTCGCCTGGACGCTTGCTCAACTGGGGAGCCAATATCGGCCCAGCCACACGAGAAGTCGTCAA
TAAGATGCTTAACTCCAAGCCTCATCCAGAGCAGTCTTATCGTTCCTGCCTTGGGCTGCTCAATCTGAGTAAAACGCATG
GCGAATCGCGCCTAGAGCAAGCCTGTAAAGATGCGCTGATGCTGACAAAACCCAACTACACCTTCGTCAATAATCTGTTG
AAGAACAATCGTGAAGGCCAACTAAGCAAAGACAAAGCGAGTACACCAAACCTCGTTCATAGCAATGTTCGTGGCCCGAA
CTGTTACCACTAG

Protein sequence :
MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDADLTKALYHSKKASRDKVM
PDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGNKLFIDYCGPRLQVVNPDTG
EVREAEVFVATLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPQLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQ
TAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNERKMKQYGASRKALFDKLDKPALKP
LPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEASNRLVQIYHKGNLVAQHPLSQRERGNSTQPEHMPSN
HQHQKWSPGRLLNWGANIGPATREVVNKMLNSKPHPEQSYRSCLGLLNLSKTHGESRLEQACKDALMLTKPNYTFVNNLL
KNNREGQLSKDKASTPNLVHSNVRGPNCYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 0.0 97
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 2e-96 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 2e-96 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-96 47