|
Name : VIBHAR_01800 (VIBHAR_01800) Accession : YP_001444996.1 Strain : Genome accession: NC_009783 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1816078 - 1817385 bp Length : 1308 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGATTCTAAATTACTTCGTACAGAGCTGGATGAAACAGCTGCTAAACTGGCGCGTCGTGGCTTTAAGCTAGACGT AGAGACTATTCGTAAACTTGAAGAACAACGTAAGTCCATTCAAGTAGAAGTAGAAAATTTACAATCCACGCGTAACTCCA TCTCCAAGCAAATCGGCCAAAAAATGGCGGCTGGCGACAAAGAAGGCGCAGAAGAGATCAAGAAACAAATCGGTACTCTA GGTAGCGATCTTGATGCGAAGAAAGTTGAACTTGAGCAAGTAATGGCTCAACTAGACGAATTCACACTTTCTGTACCAAA CATCCCTGATGATGAAGTGCCAGATGGTAAAGATGAAAACGACAACGTTGAAATCTCTCGTTGGGGTGAGCCTAAGACTT ACGACTTCGAACTAAAAGACCACGTTGACCTAGGCGAAATGGGTGGCGGTCTAGACTTCGCAAGCGCAGTTAAAATCACT GGCGCACGTTTCATCGTGATGAAAGGCCAATTTGCTCGTTTACACCGTGCAATCGCTCAGTTCATGCTGGATCTTCACAC TGAAGAGCACGGCTACACAGAAATGTACGTACCTTACCTAGTAAACTCTGACAGCCTATTCGGTACTGGTCAGCTTCCTA AGTTTGGTAAAGACCTTTTCCACACTGAGCCGCTAGTAGAAAAAGTAAACGACGAAGAGCCACGTAAACTGTCTCTAATC CCTACTGCAGAAGTGCCAGTAACGAACCTAGTTCGTGACACGATTTCTGACGAAGCGGATCTACCAATTAAGATGACAGC TCACACGCCATGTTTCCGTTCTGAAGCAGGTTCTTACGGTCGTGATACTCGTGGTCTGATTCGTATGCACCAGTTCGACA AAGTTGAGCTAGTACAAATCACTAAGCCAGAAGATTCAATGAACGCACTAGAAGAGCTAACAGGTCACGCTGAGAAAGTT CTACAACTTCTAGAGCTTCCTTACCGTAAAGTGGTTCTATGTACAGGTGACATGGGCTTCGGCGCTCGTAAAACTTACGA CCTAGAAGTGTGGGTTCCTGCTCAAGAAACGTACCGTGAAATCTCTTCATGTTCTAACATGTGGGACTTCCAAGCTCGTC GTATGCAAGCGCGTTTCCGTCGTAAAGGCGAGAAGAAACCTGAGCTAGTGCACACGCTAAACGGTTCTGGTCTTGCTGTA GGTCGTACAATGGTTGCTATCCTAGAAAACAACCAAGAAGCAGACGGCCGCATTGCAATCCCTACAGTACTTCAGAAGTA CATGGCGGGCGCAACGCACATCGGTTAA Protein sequence : MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQKMAAGDKEGAEEIKKQIGTL GSDLDAKKVELEQVMAQLDEFTLSVPNIPDDEVPDGKDENDNVEISRWGEPKTYDFELKDHVDLGEMGGGLDFASAVKIT GARFIVMKGQFARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLVEKVNDEEPRKLSLI PTAEVPVTNLVRDTISDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPEDSMNALEELTGHAEKV LQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAV GRTMVAILENNQEADGRIAIPTVLQKYMAGATHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-97 | 56 |
