Gene Information

Name : VIBHAR_01724 (VIBHAR_01724)
Accession : YP_001444920.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : Type III secretory pathway, component EscT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 1730553 - 1731335 bp
Length : 783 bp
Strand : -
Note : COG: COG4791 Type III secretory pathway, component EscT; Psort location: plasma membrane, score: 23

DNA sequence : 
ATGAGTTACGATGATTTGCACCAAGCCCTGTTCCTATACAGCTTGACGCTCCCTAGGTTAATGGCTTGCTTTATATTTTT
GCCGATCTTAAACAAACAAACGCTCGGTGGCACCTTGGTAAGAAATGGTGTTTTGTGTTCGCTTGCGCTGTTTATCTTCC
CAATGATTAACCAACAAGACCTGCCCGCAGAAACGGACGGGATTTGGTTGATGGTCATCTTAGGCAAAGAGGTACTATTG
GGTATGCTGATTGGCTTTGTTGCAGCAATCCCTTTTTGGGCTATTGAGGCGGCAGGGTTTCTAGTGGATAACCAACGTGG
TGCTGCGATGGCAAGTATGTTTAACCCCACTCTCGGCTCTCAGTCAACGCCAACGGCTGTGCTATTGACTCAAACCCTGA
TCACCTTGTTCTTCTCCGGTGGTGGCTTTGTCGCTTTTATTTATGCGCTGTTTAACAGCTATTCGTCGTGGCCTGTGATT
AGTTTTTTCCCAACCGTCACTGAGGAATGGGTGCGCTTTTTCTACGCTCAGTTCGAGCAACTTATGTGGCTTGGCGTTTT
GATGTCTGCGCCTTTGGTTTTAGCCATGTTCCTTGCCGAGTTTGGACTCGCGCTGATTAGCCGATTCGCCCCACAGCTGA
ACGTTTTCTCTTTAGCCATGCCGATCAAAAGTGCCATTGCCAGCGTGCTATTGATTGTTTATTTGGCATTGATGATGGAC
CACTTTCAAGCCCTTTTCTCTGACATCGTACTGTTCAGAGAACAGCTCAATACCATTTGGTAA

Protein sequence : 
MSYDDLHQALFLYSLTLPRLMACFIFLPILNKQTLGGTLVRNGVLCSLALFIFPMINQQDLPAETDGIWLMVILGKEVLL
GMLIGFVAAIPFWAIEAAGFLVDNQRGAAMASMFNPTLGSQSTPTAVLLTQTLITLFFSGGGFVAFIYALFNSYSSWPVI
SFFPTVTEEWVRFFYAQFEQLMWLGVLMSAPLVLAMFLAEFGLALISRFAPQLNVFSLAMPIKSAIASVLLIVYLALMMD
HFQALFSDIVLFREQLNTIW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 4e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_01724 YP_001444920.1 Type III secretory pathway, component EscT VFG0396 Protein 1e-69 65
VIBHAR_01724 YP_001444920.1 Type III secretory pathway, component EscT VFG0186 Protein 2e-59 62