Gene Information

Name : VIBHAR_01723 (VIBHAR_01723)
Accession : YP_001444919.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : Type III secretory pathway, component EscU
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 1729485 - 1730534 bp
Length : 1050 bp
Strand : -
Note : COG: COG4792 Type III secretory pathway, component EscU; Psort location: endoplasmic reticulum, score: 9

DNA sequence : 
ATGAGCGGAGAAAAAACAGAACTCCCCACCCCGAAAAAACTTCGGGATGCCCGGCAAAAAGGGCAAGTCGCTAAAAGTCA
GGAAGTCGTCTCATCGGCCTTAATCCTAGCCCTAATTGCCGTCCTATTTGCTTTTGCTGACTACTATATGTCGCACATCT
CTGCCCTACTTTTATTGCCGAGTGAGTTGGCTTATCAAGGGTTTCAGGATGCGTTGCTTGACGTAGCCATCGCCATCGCC
AAAGAAATGGTTTACTTGCTGGCACCGATCCTGATCGTGGCGGCATTGATCGCCATCATGTCGAACATGGGGCAATTCGG
CTTGCTGTTTAGTGGTGAATCCGTCAAACCAGATATCAAAAAGATCAACCCTGTCGAAGGGGCAAAACGAATTTTCTCGC
TAAAGAGCATCATTGAGTTTATTAAATCGATTCTTAAAGTGTCGCTCCTTTCCTGCATTATTTGGGTCACTCTGCGGGGC
AACTTAAACACGCTACTGCAAATCCCGACATGCGGATTAGAGTGTGTACCGACCATCACCGGCGTATTGGTGAAACAACT
CATGATCATCTCTTCCGTCGGCTTTATTGTGATTGCAGCTGCCGATTACGCATATCAAAAATTCGACCACACCAAGCAGC
TGAAGATGACTAAAGACGAGGTCAAACGCGAATATAAAGAGATGGAAGGCAGCCCGGAAATCAAGAGTAAGCGTCGTCAG
TTGCACCAAGAGCTGCAAGCTTCGAACCAAAGAGATAACGTTAAACGTTCGAATGTGTTGGTCACGAACCCAACCCACAT
CGCGATTGGTTTGTACTACAAAAAGGGCGAAACACCGCTGCCTGTGATAACCCTCAAAGAAACCGATGCGATGGCAAAAC
GTATGATCGCGATAGCCCACGAAGAAGGCATCCCTGTGATGCAAAAAGTACCACTCGCACGTGCTCTTTATGCCGATGGT
CAGTTAAACCAGTACATTCCAGGCGATCTTATTGAAGCCACCGCTGAGATCCTGCGTTGGGTTGCGTCTCTTGAGCAGTC
TGAGGAATAG

Protein sequence : 
MSGEKTELPTPKKLRDARQKGQVAKSQEVVSSALILALIAVLFAFADYYMSHISALLLLPSELAYQGFQDALLDVAIAIA
KEMVYLLAPILIVAALIAIMSNMGQFGLLFSGESVKPDIKKINPVEGAKRIFSLKSIIEFIKSILKVSLLSCIIWVTLRG
NLNTLLQIPTCGLECVPTITGVLVKQLMIISSVGFIVIAAADYAYQKFDHTKQLKMTKDEVKREYKEMEGSPEIKSKRRQ
LHQELQASNQRDNVKRSNVLVTNPTHIAIGLYYKKGETPLPVITLKETDAMAKRMIAIAHEEGIPVMQKVPLARALYADG
QLNQYIPGDLIEATAEILRWVASLEQSEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 8e-97 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_01723 YP_001444919.1 Type III secretory pathway, component EscU VFG0185 Protein 1e-85 63
VIBHAR_01723 YP_001444919.1 Type III secretory pathway, component EscU VFG0397 Protein 1e-89 62
VIBHAR_01723 YP_001444919.1 Type III secretory pathway, component EscU VFG0041 Protein 4e-56 42