Gene Information

Name : VIBHAR_01709 (VIBHAR_01709)
Accession : YP_001444905.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1317
EC number : -
Position : 1714234 - 1714869 bp
Length : 636 bp
Strand : +
Note : COG: COG1317 Flagellar biosynthesis/type III secretory pathway protein; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGGTTTCATTTGTTGAAATAAAAACCGACAACTTGCAATTGGCGCCGGGCTTAAAAGTGCTCAAAGCAAAAGACTATGT
GAGTTACTTAGATTCGCAGCATTTGGTTGAGGCGGCGCACTCAAAAGCAGAAAGCATCATTGCGAAAGCGGACGAAGCCT
ATGAGCTAGAAAGGCAGCGAGGTTATCAGGACGGCATCTATCAAGCGAAGATCGAGAACGCCGAAACCATGCTGGCAACA
CTTGCTCGATGCAACGAGTACTATTTGCAGGTCGAGCAAAAAATGACAGGCGTTGTGCTCGATGCCGTCAGAAAGATCAT
CAACAGCTTTGATGATGTGGATACCACTGCAAGTGTCGTGAGAGAGGCGCTCCAGCTTGTCAGTAACCAAAAGCAAGTGA
TTCTGCATGTGCATCCAGAGCAGGTTACTGAAGTGCGGGAGAAGGTTTCCTCCATACTCAGTGATTTCCCTGAAGTGGGG
TACGTTGAAGTCATTGCCGATGCGCGTTTAAAAAACGGCGGCTGCATACTGGAGACCGAGATCGGTATTATCGATGCGAG
TATCGACGGTCAGCTGCAAGCGCTCAAGCAAGCTATTACCAAGCAATTGAGCGAACGCCAGCAGATACAGCCCTAA

Protein sequence : 
MVSFVEIKTDNLQLAPGLKVLKAKDYVSYLDSQHLVEAAHSKAESIIAKADEAYELERQRGYQDGIYQAKIENAETMLAT
LARCNEYYLQVEQKMTGVVLDAVRKIINSFDDVDTTASVVREALQLVSNQKQVILHVHPEQVTEVREKVSSILSDFPEVG
YVEVIADARLKNGGCILETEIGIIDASIDGQLQALKQAITKQLSERQQIQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 9e-51 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_01709 YP_001444905.1 type III secretion system protein VFG0220 Protein 8e-52 52
VIBHAR_01709 YP_001444905.1 type III secretion system protein VFG0411 Protein 7e-49 52
VIBHAR_01709 YP_001444905.1 type III secretion system protein VFG0049 Protein 1e-32 42