Gene Information

Name : VIBHAR_01677 (VIBHAR_01677)
Accession : YP_001444873.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1687092 - 1687853 bp
Length : 762 bp
Strand : +
Note : KEGG: nwi:Nwi_0782 1.5e-06 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives; Psort location: cytoplasmic, score: 23

DNA sequence :
GTGCATGAAGTGCAAATAAGAGCGCTTGTCCAAGAGGCCCACACTGCGAGCAATGGTTCCGCTGGTTCTCGTACTATTGC
CAGTATCGTCACAAATGCTGGCACGAGTCTGAGCCGATACCGCGCCAGAAAAATAATGAAAATGCTCGGCCTAGTGAGCG
GCCAACTACCCAAGCACAAGTATAGGAAGCAGCCACTAGAACATGTAGAGATCCCAAATCACTTGGAGAGACAGTTCGCT
GTCACTGCTCCAAATCAAGTATGGGTTGGGGATGTCACTTATGTTTGGGCTGGGAGTCGTTGGGCTTATTTAGCGGTTGT
CATCGACTTGTTTGCTCGAAAACCTATTGGCTGGGCTATGTCCTTTTCGCCCGATAGTCAATTGACCGTCAAAGCCTTAA
AGATGGCTTATGAGTCACGAGGAATGCCTACAGGAGTGATGTTCCATAGCGATCAAGGCACGCATTACACGAGTCGAAAA
TACCGTCAGGCCTTATGGCGATACCAAATTAAACAGAGTTTATCTCGACGAGGTAACTGTTGGGACAATAGCCCGATGGA
GCGCTTTTTTAGAAGCTTAAAAACAGAATGGGTACCAGTCAGTGGTTATCGTAGTTTAGAAGACGCTTGGCAGAGTATCG
TTGGCTTTATTATTAGATACTACAGCCAAATCAGGCCACACCAGTATAACGGTGGCCTGACTCCAAATGAGTCGGAAAGA
CTTTACTGGGAAACTTATAAAACTGTGGCCAATTTTAGTTGA

Protein sequence :
MHEVQIRALVQEAHTASNGSAGSRTIASIVTNAGTSLSRYRARKIMKMLGLVSGQLPKHKYRKQPLEHVEIPNHLERQFA
VTAPNQVWVGDVTYVWAGSRWAYLAVVIDLFARKPIGWAMSFSPDSQLTVKALKMAYESRGMPTGVMFHSDQGTHYTSRK
YRQALWRYQIKQSLSRRGNCWDNSPMERFFRSLKTEWVPVSGYRSLEDAWQSIVGFIIRYYSQIRPHQYNGGLTPNESER
LYWETYKTVANFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 76
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 76
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 76
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 76
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 76
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-93 76
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 76
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-93 76
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-75 69
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-75 69
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-66 62
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-66 62
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 4e-68 61
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-68 61
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-67 60
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-67 60
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-70 60
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 4e-62 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_01677 YP_001444873.1 hypothetical protein VFG1122 Protein 7e-94 76
VIBHAR_01677 YP_001444873.1 hypothetical protein VFG1484 Protein 8e-76 69
VIBHAR_01677 YP_001444873.1 hypothetical protein VFG0785 Protein 2e-68 61