Gene Information

Name : VIBHAR_01166 (VIBHAR_01166)
Accession : YP_001444383.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : pyrimidine deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1185155 - 1186279 bp
Length : 1125 bp
Strand : +
Note : KEGG: vpa:VP0679 5.5e-163 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K00082:K01498; COG: COG0117 Pyrimidine deaminase; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGGCTCAACAATCTCTCTCTTCAGAATTTACCTCTCAAGATTTCGAAATGATGTCGCGTGCGCTCAAGTTAGCGAAGCG
CGGCATTTATACAACGGCACCTAACCCGAATGTAGGCTGTGTTATTGTCCGTGACGGTGAGATAGTTGGCGAAGGTCATC
ATCACCGTGCAGGCGAGCCTCATGCCGAAGTCCACGCCATGCGTATGGCGGGGGATAAAACCCAAGGTGCGACAGCTTAC
GTAACGTTGGAGCCTTGTTCTCACTATGGCCGCACGCCACCTTGTGCTGAAGGGCTCATCAAAGCCAAAGTCGCGCGCGT
TGTCTGTGCGATGGAAGATCCCAACCCGAAAGTCGCAGGGCGCGGTTTTCAAATGCTGCGTGATGCAGGGGTAGAAGTTC
AGGTCGGCTTGTTAGAAAGCGAAGCTATTGAACTGAACAAAGGCTTCATCAAATTCATGCAAACGGGCATGCCATACATT
CAGTTGAAAATGGCGGCCAGTTTAGACGGACAAAGCGCACTCAGTAATGGTCAAAGCCAATGGATCACCTCCCCAAAGGC
TCGCCAAGATGTGCAGCGTTATCGTGCATTGAGCTGTGGGATTCTCTCAACCAGCAAAACCGTGATTGATGACAATGCGT
CATTGAACGTTCGCTGGGAGGATTTGCCAAAAAGCGTGCAAACGCAATATCCCCAAGAGGATGTCCGTCAGCCTCCGCGC
GTTATTTTCGATCGCCAGTCTCAGCTTAGTGATGATCTAAAGCTATTCAATACTGATGGTGAGCGTATCATTGTCAGCCA
AGGTAGCGATATGGTCCCTGAACTGGGTGAAAATGGCCAAATTGACTTAGCGGCGACACTAAGAAATGTAGCAAGCGGAT
ACCATATCAATCACTTGTGGGTCGAGGCAGGAGCGACGCTCGCGAGTTCGTTAATCAAAGCTAACCTTGTAGATGAACTG
ATTGTTTATCTTGCACCCAAATTGATGGGCAGCGATGGACGAGGCTTGATTGGTGCACTTGGGTTAACTGAGATGGCCCA
AGTTATCGATTTAACTATTACCGATGTTCGAATGGTGGGTGTGGATATTCGTATTACTGCAACCGTCAAACGCAACCAAA
GCTAG

Protein sequence :
MAQQSLSSEFTSQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDKTQGATAY
VTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQVGLLESEAIELNKGFIKFMQTGMPYI
QLKMAASLDGQSALSNGQSQWITSPKARQDVQRYRALSCGILSTSKTVIDDNASLNVRWEDLPKSVQTQYPQEDVRQPPR
VIFDRQSQLSDDLKLFNTDGERIIVSQGSDMVPELGENGQIDLAATLRNVASGYHINHLWVEAGATLASSLIKANLVDEL
IVYLAPKLMGSDGRGLIGALGLTEMAQVIDLTITDVRMVGVDIRITATVKRNQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-69 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-69 48