Gene Information

Name : rdgC (VIBHAR_01025)
Accession : YP_001444245.1
Strain :
Genome accession: NC_009783
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1031130 - 1032044 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACTGTCTGGTATACCGCGTTAACCGCGAGGTTAACTTCAACGCCGATCAACTGGAAACTCAACTAGC
CGAGTTCCGATTCACCCCTTGTGGCAGCCAAGATAAGCAAAAGTTTGGTTGGGTTAGCGCGATGGGTAGAAATGGCGACA
TGATGACGCACGTTTCTGAAAACCGCATTCTGATTTGCGCTAAGAAAGAAGAGAAAATGCTGCCAGCTTCGGTGATCAAA
GATTCACTAAACGCGAAAGTAGAAGCAATGGAAGCACAAGAAGGTCGTCCTCTTAAAAAGAAAGAAAAAGACAACCTTAA
AGATGACATAGTAATGGATCTGCTGCCTCGTGCATTCAGCCGCAGCAGCCACACTTACGTACTTATCATGCCAAAAGAAG
GCTTCATCCTTGTTGATGCAAGCAGCTACAAAAAAGCAGAAGACGTGTTAGCACTATTGCGTAAAACAATGGGTAGCCTA
CCTGTTGTACCAGCAATCCCAGAAGTTGCTATCGAAACGACGCTAACGGAATGGGTGAAAACCGGTGATACGCCACAAGG
CATTTCTATGATGGACGAAGCTGAACTTAAGTCTGTGCTAGAAGAAGGCGGCGTGATTCGTTGTAAGAAGCAAGAGCTGA
CAACCGATGAAATCCGCAACCACATCGCTGCAGACAAAGTAGTGACTAAGCTAGCACTGAACTGGCAAGATCGTATCGAA
TTCATCATGGCAGAAGATTCTGGCATCAAACGTCTGAAGTTCTCTGATGAACTAAAAGATCAAAACGATGACATCCCACG
CGAAGATCAAGCTGCTCGCTTCGACGCAGACTTCTCTCTAATGTGTGGCGAGTTCAGCGCTTTCCTACCAAATCTATACG
AAACATTGGGCGGCCTGCCAAACCCTAACGCTTAA

Protein sequence :
MWFKNCLVYRVNREVNFNADQLETQLAEFRFTPCGSQDKQKFGWVSAMGRNGDMMTHVSENRILICAKKEEKMLPASVIK
DSLNAKVEAMEAQEGRPLKKKEKDNLKDDIVMDLLPRAFSRSSHTYVLIMPKEGFILVDASSYKKAEDVLALLRKTMGSL
PVVPAIPEVAIETTLTEWVKTGDTPQGISMMDEAELKSVLEEGGVIRCKKQELTTDEIRNHIAADKVVTKLALNWQDRIE
FIMAEDSGIKRLKFSDELKDQNDDIPREDQAARFDADFSLMCGEFSAFLPNLYETLGGLPNPNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-70 52