Gene Information

Name : SAHV_1939 (SAHV_1939)
Accession : YP_001442529.1
Strain : Staphylococcus aureus Mu3
Genome accession: NC_009782
Putative virulence/resistance : Unknown
Product : phi PVL ORF 20 and 21 homologue
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3064
EC number : -
Position : 2091815 - 2095597 bp
Length : 3783 bp
Strand : -
Note : -

DNA sequence :
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCA
TAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGAC
ATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTAC
ACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAA
GACAACTTCAGAAGCATTGAAAGATGTGTTGAGCGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTAC
GTACTACATCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGCATTGGAT
TTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAA
AGAAATTGAGTATGGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTG
TGGGACCCGAAAATGACAAAGGAAAGCGTTTAGAGTTAGTTGTGACTGATGACGAAGCACAAAGTCAATTCAACTTACCT
ACCCGTTATATTTGGGGAATATACGAACCTCAATCAGATGATCAAAATATGAATGAAACACGGTTGCGTTCTTTAGCCAA
AACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACG
AGATTATATCAATTGGTGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATT
GCCGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACG
AGAAGAGTTTAACAAACGATTGAATATAATACATCAAAAGTTAAACGATAATATTAGCAATATCAACACTATAGTTAAAG
ATGTTGTAGATGGTGAATTAGAATACTTTGAACGCAAAATACACAAAAGTGATACACCGCCAGAAAATCCAGTCAATGAT
ATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGCAACACC
AAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATTTTTATTAATTTAT
CTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCG
GACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAAC
TGCAACGATTGGTCGGTTGGTAGATACACAAGCTTTATTTCTTGAGTATAGAAAGAAATTACAAGATGTTTATACAGATG
TAGAAGATGTCAAAATCGCCATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCG
TTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATC
AGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAG
ACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTA
AACGAATATCGAAACGGATTGGAAGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGAT
TAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATGATCTTAAAG
AGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTT
GAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAA
AGAAAGCACAGATGCACAGAGGAAAACATTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAA
GAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGAGATTGTTCAAAATGTTACAGAT
GGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTGAATGTGGGGCCACGTGGTATTAGATTAAATGCTGA
TAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTG
TCAACAGCCTTAATTTATCAAGAGAGGGTCTTGATATCAATGTTAATAGAATTGGAATTAAAGGCGGTGACAATAACAGA
TATGTTCAAATACAGAATGATTCTATTGAACTAGGTGGTATTGTGCAACGTACTTGGAGAGGGAAACGTTCAACAGACGA
TATTTTTACGCGACTGAAAGACGGTCACCTAAGATTTAGAAATAATACCGCAGGCGGTTCACTTTATATGTCACATTTTG
GTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGT
GATAGCGGTATGAATGGCATAACAATCAATTCTTATGGCGGTGTAGTCGCTTTAACATCTGACTACAATCGAATTATTAT
CGATTCATATGCTTCAGCTAATATTGAAAGTAGAGAAGCGCCGATATATTTATCTCCGAACACCAAAAATAAACCTGGTT
TAAACCGATTCGCATTCACATTATCAAACGCTGATAGTGCATACGAAACTGACGGTTATATCATGTTTGGTTCAGATGAA
AACTATAAGTACGGTGCTGGATTAAGATTTTCTAAACGTAGCAATAAAGGATTGGTTCAAGTCGTTAATGGTGACTATGC
TACAGGCGGAGACACTACAATTGAATCAGGTATGGGCAAATTCAACTTAGTTAAACGAAGAGATGGAAATAGTTACGTTA
GCATTCAAAGTTATGATTTATTGGCGGTAGGTTCTGATAATGCTGGCGATAGAGTCGCTTCTAATTCTATTTATAAGCGT
ACTTATTCAGCACCTGCTAACTTACACATTACTTCTGCTGGAACAATTGGGCGTGCTACTTCTGCCAAAAAGTATAAAAT
TTCAATCGAAAACCAATACATCAATGAAGACGATCAGTTCAGTCATTCAAAAGAGATTTTAAAGCTTCCAATTCGTACAT
GGTTTGACAAATATGAATCGGAAATAATGGCTAAAGAATTGGAAAGTGGTAAAAAGTTATCTGATGATACTTTTAAACTT
AGTCGACATACTGGCTTAATAGCGGAAGAGGTTGAAGAATTAGGATTTAATGAATTTGTTATTTATGATGACAACGGAGA
AATCGAAGGTATCGCATACGATAGACTTTGGGTTCATTTAATACCTATTATTAAAAACCAGCAATCAAAAATCGAAAAAC
TGGAGGAATTAATAAATGAATGA

Protein sequence :
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGY
TEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMALD
FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLP
TRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDGELEYFERKIHKSDTPPENPVND
MLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKA
DLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTQALFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEA
LEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTL
NEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDDLKEKESQAYADGKISEEEQRAIQDAQAKL
EEAKQNAELKARNAEKKANAYTDNKVKESTDAQRKTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTD
GTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGDNNR
YVQIQNDSIELGGIVQRTWRGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYS
DSGMNGITINSYGGVVALTSDYNRIIIDSYASANIESREAPIYLSPNTKNKPGLNRFAFTLSNADSAYETDGYIMFGSDE
NYKYGAGLRFSKRSNKGLVQVVNGDYATGGDTTIESGMGKFNLVKRRDGNSYVSIQSYDLLAVGSDNAGDRVASNSIYKR
TYSAPANLHITSAGTIGRATSAKKYKISIENQYINEDDQFSHSKEILKLPIRTWFDKYESEIMAKELESGKKLSDDTFKL
SRHTGLIAEEVEELGFNEFVIYDDNGEIEGIAYDRLWVHLIPIIKNQQSKIEKLEELINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1953 NP_372477.1 phi PVL ORF 20 and 21-like protein Not tested ¥ÕSa3 Protein 0.0 100
MW1893 NP_646710.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 99
SA1764 NP_375062.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 96
SAOV_1916c YP_005737361.1 Structural protein, phage associated Not tested ¥ÕSa3 Protein 0.0 94
SAKOR_01930 YP_008492118.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 94
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 94
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 94
SAOV_1117 YP_005736612.1 Structural protein, phage associated Not tested ¥ÕSa2 Protein 0.0 94