|
Name : rplS (SAHV_1231) Accession : YP_001441821.1 Strain : Staphylococcus aureus Mu3 Genome accession: NC_009782 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1303643 - 1303993 bp Length : 351 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGACAAATCACAAATTAATCGAAGCAGTAACTAAATCACAATTGCGTACAGACTTACCAAGTTTCCGTCCTGGTGATAC TTTACGTGTACACGTACGTATCATTGAGGGTACTCGTGAGCGTATCCAAGTATTCGAAGGCATTGTAATTAAACGTCGTG GCGGTGGCGTTTCTGAAACGTTTACAGTTCGTAAAATTTCATCAGGTGTTGGCGTGGAACGTACATTCCCATTACACACA CCAAAAATTGAAAAAATCGAAGTTAAACGTCGTGGTAAAGTACGTCGTGCTAAATTATATTACTTACGTAGTTTACGTGG TAAAGCTGCTAGAATCCAAGAAATTCGTTAA Protein sequence : MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHT PKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-41 | 77 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-27 | 55 |
