Gene Information

Name : ESA_03574 (ESA_03574)
Accession : YP_001439621.1
Strain : Cronobacter sakazakii ATCC BAA-894
Genome accession: NC_009778
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3513202 - 3513864 bp
Length : 663 bp
Strand : +
Note : response regulator in two-component regulatory system with BasS

DNA sequence : 
ATGAAACTGCTGATAGTCGAAGATGATCTGCTGTTACAGGAAGGACTGGCGCTGGCGCTCGGCAACGAGGGCTATGCGCT
GGATTGCGCCGCGAATGCCGCCGAGGGCGACGCCCTGCTCCAGAGCGGCGAATACAGTTTGATTATTCTCGACTTAGGGC
TGCCGGATAAAGACGGCGCCACGCTGCTCAGCCAGTGGCGCCGGAGCGGTGTGACAACGCCAGTGCTTATTCTCACGGCG
CGTGACGCGCTGGAAGATCGCGTGAGCGGGCTTGATGCGGGTGCGGATGATTATCTGGTTAAACCCTTTGCGCTGGCGGA
GCTTCACGCCCGCGCGCGGGCGCTTATCCGCCGTTATCAGGGGCACAGCGATAATCTGTTGCAGCACGACGATATCACGC
TCAATCTGCAAACCCAGCAGGTACTGCTCCAAGGAATGCCTGTAGAAGTGACGCCCAAAGAGTTTGCGTTACTCACCCGC
CTGATGATGCGCATCGGCCAGACGGTGCACCGCGAAACCCTGCAACAGGACATCTACAGCTGGCAGGACGATCCCAGCTC
GAATACGCTTGAAGTGCACATCCACAATCTGCGCCGTAAGCTCGGTAAAACCCGCATTCGTACCATACGCGGCGTGGGCT
ACCGGCTGGAGCGGCCATCATGA

Protein sequence : 
MKLLIVEDDLLLQEGLALALGNEGYALDCAANAAEGDALLQSGEYSLIILDLGLPDKDGATLLSQWRRSGVTTPVLILTA
RDALEDRVSGLDAGADDYLVKPFALAELHARARALIRRYQGHSDNLLQHDDITLNLQTQQVLLQGMPVEVTPKEFALLTR
LMMRIGQTVHRETLQQDIYSWQDDPSSNTLEVHIHNLRRKLGKTRIRTIRGVGYRLERPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-24 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-18 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ESA_03574 YP_001439621.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 7e-47 69
ESA_03574 YP_001439621.1 DNA-binding transcriptional regulator BasR BAC0197 Protein 3e-19 44
ESA_03574 YP_001439621.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 1e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ESA_03574 YP_001439621.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 3e-39 57
ESA_03574 YP_001439621.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 1e-18 42