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Name : ESA_01974 (ESA_01974) Accession : YP_001438063.1 Strain : Cronobacter sakazakii ATCC BAA-894 Genome accession: NC_009778 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1910461 - 1912848 bp Length : 2388 bp Strand : - Note : COG: COG3188 P pilus assembly protein, porin PapC; Psort location: cytoplasmic, score: 23 DNA sequence : ATGAAAGGGGCAGACTTGTCTTCTTTTGAGTCGGGAACTCAGGCGCCGGGGACATATCGTGTTGATATTATTATTAACGA CCAGACGGTCGACACACGCGATATCGAATTCAAAACCCTCAGAGATACCAGTGGCCAAGAAAGACTGGAACCATGTCTAC CGATAGCGTTGCTTCAAAGCTATGGCGTGAAAACGACATTATTCCCTGAGCTTAATGCTGATGGAAAATGCGCGCGTTTA TCTGCCATTCCTAAAGCTTCTTCTGAGTTCTTATTTAATGCGCAAAAGCTGGTTCTGAGCATACCGCAAGCTGCTTTGTC GCCGCAGGCGCGTGGTTATGTAGACCCTGCACTCTGGGATGAGGGTATTCCCGCTGCGATGCTTAACTACAGCATGAGTG GTGCGAATAATTACGCCGACAAGGGGGCAAACAGCAACAGCCAGTACGCCAACCTGCGCCCGGGGATTAACCTGGGAGCC TGGCGGTTGCGTAACTACACGACCTGGAACCGCGACGAAAAAGGTAAGGATAAATGGGATACCGTTTATACGTATCTGCA ACGCAATATTGTACCGCTCAAAGCAAAACTGGTGGCGGGTGATAGCTCCTCGCCAGCGGATGTGTTTGACAGTATCTCGT TTCGTGGGGCCCAGCTTGCTTCTGATGACGACATGATACCGGAATCCCAGCGCGGCTATGCGCCAGTCGTGCGTGGTGTG GCTCGCACCAATGCGCAAATTGTGATTCGGCAGAATGGCTATGTCATTTATCAAAGCTATGTGGCAGCAGGTGCCTTTGA AATTACCGACATGTACTCCACTGGCGGCGCGGGCGATCTGAATGTCACGGTGAAAGAGGCTGACGGGAGTGAACAGCATT TTGTGGTGCCGTTTGCCTCCTTACCGGTATTACAACGTGAAGGTCGTCTGAAGTACGCCCTAACGGGCGGTCAGTATCGT TCTTATGATAGCAGCGTCGAAAAAACACCGTTTGCCCAGTTTACTGGGATCTTCGGTCTTCCGCGCGGCTTTACATTGTA TGGCGGTCTCCAGGAGGCAAGTAAATACCAGGCACTGGCGCTCGGTCTCGGTAAGAATATGGGGGCCATCGGTGCCATTT CTGCAGATGTCATTCAGGCATGGTCACGCCTTAAAGACATGGAGAAGAGCAGCGGTCAGTCCTGGCGCATTCGCTACAGT AAAGACTTTGTAGAAACCGGCACTAACTTTTCAATCGCGGGTTACCGTTACTCTACGGCGGGCTTCTACAGTATGCAGGA AGTGCTTGATTCCTATGGTAACAATTCAGCTATGCTGGATCGCCGCCGTAACCGGGCAGAGCTGTCTATCAGCCAGTCGC TTGGAGGTTCGCTGGGCTCGCTGACCGCCAGTGCGGTACGTGAAGATTACTGGGGTAAGAACAAAACCATGGAGTCGTAT AACGTTGGTTATAACAACTCCTGGCGGGGTATCAGCTATGGGTTGACCTATACCTACAGTAAAAACGGCAGTGCCGGTAA CTACAACAACAGCGTGAGTTACGACAAAGACCAGATTATAGCCCTCAATATCAGCGTGCCGCTGGAGCGTTTCTTGAGCA ATACCTGGGCCAATTACAGCATGAATGACAGTAAAAACAACGGCACTACGCATACTGCGGGCATGAGCGGTATGGCGCTG GAAAATAATGCGTTGAGCTGGAATGTGCAACAAGGCTATGGGAGCGATGACGTCGGGTATAGCGGTAACATGAACGCTGA TTATAAAGGCACCTACGGCGAAATGACGGCAGGCTACAGCTACGACAAAAATGGCGAACGCCTGAACTATGGCCTGCAGG GCGGCATCCTGGCTCATGAAGATGGTATCACGCTGTCGCAGCCGCTGGGTGAAACTAACGTACTGGTCAAAGCGCCAGGC GCGGGCGGCGTCAGTATTCAAAACCAGACGGGCGCGAAAACCGACTTTCGTGGGTATACCACGGTGAGCAATGTGACACC GTACCGTAAGAATGATGTAACGCTTAATACGGAAAGCATGCCGGACGATGTGGATCTGGAACTCACCAGCCGTACCGTCG TGCCAACGCGCGGAGCGGTAGTACGTGCTGAATATGTGGCCAATGTCGGTTTGCGTGTGCTTATGACGCTGCTTCAGGCT AATGGCCAGCCAGTGCCCTTTGGCGCTACGGTCACAGTTCCAGGTCAACATAACCAAGGATTCATCGTCGGCGATAAAGG GCAGGTGTATATCACAGGTTTGCAGCCAGAAGGCACGTTAAACGTTCAGTGGGGGCAAACAAATAATGAAATGTGTGGCG TGAATTACCACCTTCCTGAAACAGAAACAACAAGCGGAATATTAACCTTCAACGGGCATTGTAAGTAA Protein sequence : MKGADLSSFESGTQAPGTYRVDIIINDQTVDTRDIEFKTLRDTSGQERLEPCLPIALLQSYGVKTTLFPELNADGKCARL SAIPKASSEFLFNAQKLVLSIPQAALSPQARGYVDPALWDEGIPAAMLNYSMSGANNYADKGANSNSQYANLRPGINLGA WRLRNYTTWNRDEKGKDKWDTVYTYLQRNIVPLKAKLVAGDSSSPADVFDSISFRGAQLASDDDMIPESQRGYAPVVRGV ARTNAQIVIRQNGYVIYQSYVAAGAFEITDMYSTGGAGDLNVTVKEADGSEQHFVVPFASLPVLQREGRLKYALTGGQYR SYDSSVEKTPFAQFTGIFGLPRGFTLYGGLQEASKYQALALGLGKNMGAIGAISADVIQAWSRLKDMEKSSGQSWRIRYS KDFVETGTNFSIAGYRYSTAGFYSMQEVLDSYGNNSAMLDRRRNRAELSISQSLGGSLGSLTASAVREDYWGKNKTMESY NVGYNNSWRGISYGLTYTYSKNGSAGNYNNSVSYDKDQIIALNISVPLERFLSNTWANYSMNDSKNNGTTHTAGMSGMAL ENNALSWNVQQGYGSDDVGYSGNMNADYKGTYGEMTAGYSYDKNGERLNYGLQGGILAHEDGITLSQPLGETNVLVKAPG AGGVSIQNQTGAKTDFRGYTTVSNVTPYRKNDVTLNTESMPDDVDLELTSRTVVPTRGAVVRAEYVANVGLRVLMTLLQA NGQPVPFGATVTVPGQHNQGFIVGDKGQVYITGLQPEGTLNVQWGQTNNEMCGVNYHLPETETTSGILTFNGHCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 4e-146 | 42 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-146 | 42 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 2e-139 | 41 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 1e-139 | 41 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 1e-139 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ESA_01974 | YP_001438063.1 | hypothetical protein | VFG0454 | Protein | 4e-166 | 44 |
| ESA_01974 | YP_001438063.1 | hypothetical protein | VFG0876 | Protein | 4e-152 | 43 |
| ESA_01974 | YP_001438063.1 | hypothetical protein | VFG1645 | Protein | 1e-146 | 42 |
| ESA_01974 | YP_001438063.1 | hypothetical protein | VFG0446 | Protein | 2e-143 | 42 |
| ESA_01974 | YP_001438063.1 | hypothetical protein | VFG0912 | Protein | 3e-146 | 41 |
