Gene Information

Name : ESA_01778 (ESA_01778)
Accession : YP_001437868.1
Strain : Cronobacter sakazakii ATCC BAA-894
Genome accession: NC_009778
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1721439 - 1722233 bp
Length : 795 bp
Strand : -
Note : KEGG: nwi:Nwi_0782 3.7e-09 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCTGACCGGGCAGATCAAACAGTTCTGGCTTGAGTCTGGCTGCGTCTATGGTTATCGCAAGATCCATCTCGATCTGCG
TGATACCGGGCAGCAGTGCGGAGTGAACCGGGTCTTGCGGCTGATGAAGCGTGCCGGAATAAAAGCTCAGGTTGGGTACC
GTAGCGCACGGGCACGTAAAGGCGAAGCCAGTATCGTGTCGCCTAACAGGCTCCAGCGGCAGTTCAATCCGGATGCTCCG
GATAAGCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGATGGCTGTATCTGGCTGAGGTTGTTGACCTGTT
CTCGCGTAAGGTTATCGGCTGGTCAATGCAGCCCCGGATGACAAAAGATATTGTTCTAAAGGCACTTCTGATGGCCGTGT
GGCGACGCAATCCTCAAAAACAGGTGCTGGTTCATTCTGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTG
TTGAAATCACACGGACTGGTGAGGAGTATGAGCCGTCGTGGTAACTGTCACGATAACGCGGTTGCAGAAAGCGTTTTCCG
GTTACTGAAACGTGAGCGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGCGATATTTTTGATTACATCG
AAATGTTTTATAACAGTAAGCGTCGGCATGGTTCGGGCGATCAGATGCCACCAACTGAGTACGAAAACCAATATTATCAG
CGGCCCGGAAGTGTCTGGATTATCTGTGGCGATTTCATGTGCCTATCACTCTCTTCCTTCCCGACGATATACTGA

Protein sequence :
MLTGQIKQFWLESGCVYGYRKIHLDLRDTGQQCGVNRVLRLMKRAGIKAQVGYRSARARKGEASIVSPNRLQRQFNPDAP
DKRWVTDITYIRTHEGWLYLAEVVDLFSRKVIGWSMQPRMTKDIVLKALLMAVWRRNPQKQVLVHSDQGSQYTSHEWQSL
LKSHGLVRSMSRRGNCHDNAVAESVFRLLKRERIKKKIYGTREEARSDIFDYIEMFYNSKRRHGSGDQMPPTEYENQYYQ
RPGSVWIICGDFMCLSLSSFPTIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-36 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-37 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-36 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 8e-36 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-36 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-35 43
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 5e-26 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 5e-26 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 7e-32 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-32 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-32 41
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-25 41
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-25 41
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-25 41
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-25 41
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-25 41
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-25 41
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-25 41
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ESA_01778 YP_001437868.1 hypothetical protein VFG1631 Protein 6e-36 43
ESA_01778 YP_001437868.1 hypothetical protein VFG1484 Protein 3e-26 42
ESA_01778 YP_001437868.1 hypothetical protein VFG1122 Protein 2e-25 41