Gene Information

Name : VIBHAR_p08245 (VIBHAR_p08245)
Accession : YP_001436112.1
Strain :
Genome accession: NC_009777
Putative virulence/resistance : Virulence
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 62203 - 62742 bp
Length : 540 bp
Strand : -
Note : COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGAATCTTGGTTACGCACGAGTCAGTACTGATGATCAAAATCTTGATGTACAGCTTTCTCAACTCGAAAAAATTGGTTG
TGAGAAGATATTTCAAGATAAAGCCAGTGGTAAATCTTCCGAACGTGAAGCATTGAACAAGTTAATCGACTTCGCCAGAG
AAGGGGATGTGGTTCACGTGACCAAGGTTGATCGAATTGCGCGCAATACGATAGATGCATTACAAATTGCCGATCAGCTT
GCAAATAAAGGGGCAGGGTTGGTATTTCATGATCTCGGAGATTTGGATATCAATAGCGATGTTGGTCGTGTTATCTATAC
CACTATTTCCGCGTTCGCAGAGATGGAAAGAAAACGTATTTTACAGCGCTGTAATGAGGGTAGGGAGCGCGCCAGAGCGG
AAGGGAGGCACCTCGGCCGATTTCCTAATAAGACCTTACATTCACGCATACAGGAGCTTGCAGAACAGGGAATGAACAAG
CACGCGATCAGTAAAGAACTCGGGTGCAGTCGGACGACGGTGTATAAGGTGCTGGAGTGA

Protein sequence : 
MNLGYARVSTDDQNLDVQLSQLEKIGCEKIFQDKASGKSSEREALNKLIDFAREGDVVHVTKVDRIARNTIDALQIADQL
ANKGAGLVFHDLGDLDINSDVGRVIYTTISAFAEMERKRILQRCNEGRERARAEGRHLGRFPNKTLHSRIQELAEQGMNK
HAISKELGCSRTTVYKVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-24 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-14 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-14 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-14 41
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 7e-22 41
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 7e-22 41
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 7e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_p08245 YP_001436112.1 resolvase VFG1030 Protein 4e-15 41