Gene Information

Name : VIBHAR_p08194 (VIBHAR_p08194)
Accession : YP_001436061.1
Strain :
Genome accession: NC_009777
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 24023 - 25222 bp
Length : 1200 bp
Strand : -
Note : COG: NOG04673 non supervised orthologous group; Psort location: mitochondrial, score: 23

DNA sequence :
ATGCGCGATATTCAAATTCTACAGCAAGCTATTGAGAATCAATGCCCTGACATTCACAAAAAACGACTTAGATCTCTGAT
GCTTGCAACCAAAGCGGTTCTTGATGGCTCTGCTCTAACACTCACTAAAATTGGAAGAGCTCTCGACACTGATACCACAG
TGAAACATGCCATCAAACGTATCGACCGACTACTTGGTAATCGCAATCTACATCGTGAAAAAGAATCCATATATAGATGG
CATGCGTCTTTTATTACCCGCGCCAATCCATTTCCGGTGGTGCTGGTCGATTGGTCGGATGTTCGAGAGCAATTACGCTA
CATGACATTACGTGCTTCGGTATCTGTTAAAGGTCGCGCCGTCACGCTTTATGAGCAGGCATTCGAGTACAAAAACTACA
ACTCACCCAAAAGTCATCAACTCTTTCTCGATAAGCTTCAATCCCTGCTCCCCCAAGGCTGCACGCCCATCATTGTCTCT
GATGCGGGCTTTAGAAATACGTGGTTCCGGCAAGTGGCCAACAAAGGTTGGTTCTGGCTTGGGCGTGTACGTGGCGAAGT
CTCGATTAAGTGCGGCGAGGGCGCGTGGCTATGGAACAAAACGTTTTATCCTCAAGCAACAGATAAACCACTGTTTTTAG
GAGAAAGCCAACTTGCTAGGCGTTCGCCGCTCAGGTGTTTTGCGTATTTGTATAAAGGCCAGCCCAAAGGCAGAAAAGCG
CATCGACATAGTCGAACCTGCCAGAAACACTCGGCTGGGAAAGTGTTCCATAAAGGAGCAAAAGAGCCTTGGCTTCTGGT
CACCAACATCCCCAATCATGTACTTAACGGCGTCAAAATCACTCGTTTGTACGCCAAAAGAATGCAAATTGAAGAGTCGT
TCCGAGATTTGAAAAGCCCCGCTTACGGATTAGCGCTACGCCACAATCGGACACGTTGCACTAAGCGCATTGATATCTTG
CTACTCATGGCATTGATGGCCGAAATCATCATGTGGTGGAATGGCTTAATCGCCATGCAAGCCAAATGGCATTATGACTT
CCAAGCTAACACCATCAAGCATCGGCGTGTGCTCTCGATCCCTAGACTGGGAAAGGAAGTACGCAGCCATCGGCGATACC
GAATAAAAGAATCGCAATATCATTGGGCGATGGTGGAATATCAACGCCTCACCCATACTTGCGGGTTAGGTGAATTATGA

Protein sequence :
MRDIQILQQAIENQCPDIHKKRLRSLMLATKAVLDGSALTLTKIGRALDTDTTVKHAIKRIDRLLGNRNLHREKESIYRW
HASFITRANPFPVVLVDWSDVREQLRYMTLRASVSVKGRAVTLYEQAFEYKNYNSPKSHQLFLDKLQSLLPQGCTPIIVS
DAGFRNTWFRQVANKGWFWLGRVRGEVSIKCGEGAWLWNKTFYPQATDKPLFLGESQLARRSPLRCFAYLYKGQPKGRKA
HRHSRTCQKHSAGKVFHKGAKEPWLLVTNIPNHVLNGVKITRLYAKRMQIEESFRDLKSPAYGLALRHNRTRCTKRIDIL
LLMALMAEIIMWWNGLIAMQAKWHYDFQANTIKHRRVLSIPRLGKEVRSHRRYRIKESQYHWAMVEYQRLTHTCGLGEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 6e-84 50
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 2e-83 50
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 2e-83 48
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 5e-84 48
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 3e-84 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VIBHAR_p08194 YP_001436061.1 transposase VFG0647 Protein 3e-84 50