Gene Information

Name : Igni_1270 (Igni_1270)
Accession : YP_001435853.1
Strain : Ignicoccus hospitalis KIN4/I
Genome accession: NC_009776
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1132391 - 1133062 bp
Length : 672 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
TTGTCGTGCGTGGCCGCCAGGGGGGTCTGGAAGGGCTATCGGGTCGGCCCTCAGAGGGTGGAGGTCCTCCGGGGGGTCGA
CCTCGAGGCGGGCTTCGGGGAAGTGGTTGCGGTGGTGGGCCCCTCGGGCTCCGGGAAGAGCACGCTCCTCCACTTGATCT
CTACGGTAGACTACCCGGATAGGGGCTCAATATTTCACTTGGGCAAAAAGGTCCTCAAGAGCGAGGAGTGGAGGGCCAAG
TGGAGGAGACACAACGTAGGCGTGGTGTTCCAGAGCTTGCAGTTGATACCTACCTTGACCGTTCTCGAGAACGTCATGCT
TCCCATGGAGTTGGTCGGGATGCCTCCGCACAAGGCCAAGCTGAGGGCGAAAATGTTGTTAGAGAGGCTAGGGTTAGGCG
ATAAGCTCGAACGCTACCCGACGGAGCTCTCCGGAGGGGAGCAGCAGAGGGCGGCCGTCGCCAGAGCTTTGGCGAACTCG
CCCAAGATACTGGTGGCGGACGAGCCCGCCTCCAACTTGGACAAAGGGAATAGGAGGTTAGTCGCGAGCATAATTAGGGA
GTTCGCGGACTCCGGCGGGTGCGCTATAGTTAGCACTCACGAGGAGGAGATAGTCGCCGTCGCCGACGCAGTCTGCGCTT
TGGAGGGGGGTAGGTTGAATTGTCGGCGCTGA

Protein sequence : 
MSCVAARGVWKGYRVGPQRVEVLRGVDLEAGFGEVVAVVGPSGSGKSTLLHLISTVDYPDRGSIFHLGKKVLKSEEWRAK
WRRHNVGVVFQSLQLIPTLTVLENVMLPMELVGMPPHKAKLRAKMLLERLGLGDKLERYPTELSGGEQQRAAVARALANS
PKILVADEPASNLDKGNRRLVASIIREFADSGGCAIVSTHEEEIVAVADAVCALEGGRLNCRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Igni_1270 YP_001435853.1 ABC transporter NC_008702.1.4606598. Protein 1e-22 42