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Name : Rcas_4445 (Rcas_4445) Accession : YP_001434479.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Virulence Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 5712968 - 5713657 bp Length : 690 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0761 two component transcriptional regulator, winged helix family DNA sequence : ATGCAGGGGAATGAGCAGCGTCGGATTCTGATCGTGGATGATGAGCCTGGTCTGCGTGATCTGCTGCGTATCAACCTCGA GCATGAAGGATTCAGCGTGATTGAGGCTGAAAGCGGTGCTCAGGGATTACAGATGGTGCGTGACCAACATCCCGATCTGA TGATCCTCGATGTAATGATGCCGGAAATGGACGGATGGGAGGTCTGTCGGCGGTTGCGCGAGTTCTCACAGATGCCGGTG TTGATGCTGACAGCGCGTACACAGAGCAAGGATATCGTCACCGGGCTTGAAAGCGGCGCCGATGATTACTTGACCAAGCC GTTCAATATGGACGAGTTGACGGCGCGCATTCGAGCGCTGCTGCGACGGGTGCCCTCTCCCAATCGCCCGATCGTCGCTG GCGGCGGCGAAATCATGATCGACAAGCAGAAGCGTGAGGTGCTGGTGCGTGGCGAGCCGGTCGATCTGACGCCAACCGAG TACGATCTGCTTCTCCTGCTTGCCGAACATGCCGGCGCGGTGCTCGATCACGAAACACTTCTACGCGGCGTGTGGGGGCA TGAGTATACGAAGGACAACGACTATCTCAAAGTCTATATCTGGCATCTGCGCCGCAAAATTGAACAGGACCCGCGTGAAC CGAAATTGCTGCTGACTGAATGGGGAGTCGGGTATCGTCTGGCGCCGTGA Protein sequence : MQGNEQRRILIVDDEPGLRDLLRINLEHEGFSVIEAESGAQGLQMVRDQHPDLMILDVMMPEMDGWEVCRRLREFSQMPV LMLTARTQSKDIVTGLESGADDYLTKPFNMDELTARIRALLRRVPSPNRPIVAGGGEIMIDKQKREVLVRGEPVDLTPTE YDLLLLLAEHAGAVLDHETLLRGVWGHEYTKDNDYLKVYIWHLRRKIEQDPREPKLLLTEWGVGYRLAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 4e-36 | 42 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-31 | 41 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 1e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | AE016830.1.gene1681. | Protein | 3e-40 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0083 | Protein | 3e-33 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | FJ349556.1.orf0.gene | Protein | 3e-40 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | AF155139.2.orf0.gene | Protein | 2e-40 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP004022.1.gene3215. | Protein | 1e-26 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002695.1.915041.p | Protein | 8e-22 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP000034.1.gene3834. | Protein | 8e-22 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP000675.2.gene1535. | Protein | 4e-32 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | AE015929.1.gene1106. | Protein | 6e-33 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0125 | Protein | 5e-32 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0308 | Protein | 2e-32 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | HE999704.1.gene2815. | Protein | 6e-39 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 3e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 3e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 3e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 5e-38 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | NC_012469.1.7685629. | Protein | 3e-36 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0197 | Protein | 8e-30 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP001138.1.gene4273. | Protein | 1e-21 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0533 | Protein | 6e-22 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP000647.1.gene4257. | Protein | 6e-22 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | HE999704.1.gene1528. | Protein | 2e-31 | 41 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP001485.1.gene721.p | Protein | 1e-28 | 41 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | BAC0638 | Protein | 7e-30 | 41 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | AE000516.2.gene3505. | Protein | 2e-36 | 41 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | CP001918.1.gene5135. | Protein | 6e-17 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG1390 | Protein | 9e-40 | 44 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG1386 | Protein | 5e-38 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG1389 | Protein | 6e-32 | 43 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG1702 | Protein | 2e-36 | 42 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG0596 | Protein | 5e-32 | 41 |
| Rcas_4445 | YP_001434479.1 | two component transcriptional regulator | VFG1563 | Protein | 9e-36 | 41 |
