Gene Information

Name : Rcas_4405 (Rcas_4405)
Accession : YP_001434439.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Unknown
Product : oxidoreductase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0673
EC number : -
Position : 5656302 - 5657411 bp
Length : 1110 bp
Strand : -
Note : PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3454 oxidoreductase domain protein

DNA sequence :
ATGATCACCCCCGCCAACGTCGGCATTATTGGCTGTGGCAACATCAGCGGCATCTACCTGGAAAATAGCAGGATGTTCGA
CGCGCTCAACGTCGTCGCCGTGGCGGACATCGATCCGGATCGGGCGCAGGCGCGCGCGGCGGAGTACAACGTTCCCAAAG
CGTGTAGTGTCGAGGAATTGCTGGCCGATCCCGACATTGAGATTGTCATCAACCTGACCACCCCCGATGCCCATGGTCCG
GTCGCGCTTGCAGCCTTGAACGCCGGCAAGCACGTCTATAACGAAAAGCCGCTTGCCGTCACCCGCGACGAGGCGCGCGC
ATTGCTCGATCTCGCTGAACGCAAAGGGCTGCGTGTCGGCTGTGCGCCCGATACGTTCCTCGGCGGTGGGTTGCAGACCT
GCCGTAAACTGATCGATGACGGCTGGATCGGTGAGCCGATCGGGGCGACGGCTTTCATGATGAGCCACGGACCAGAAAGC
TGGCATCCGAACCCCACATTTTTCTACCAGCCCGGCGGCGGTCCGATGTTCGATATGGGACCCTATTACCTGACGGCGCT
CTGTGTGCTGCTTGGTCCGGTGCGACGGGTGACCGGCTCGGCGCGTATATCGTTCGCGGAACGCACGGTGACCGGCGAGC
GCAACTATGGCGCAACGATTCCGGTCAACACCCCGACGCATGTCGCCGGTGTGCTCGATTTCGCTTCTGGCGCAGTGGCA
ACAATCATCACCAGTTTCGATGTCTGGAGTTCGCAATTGCCGCGCATCGAGATTTACGGTTCGCACGGCACGCTGAGCGT
TCCCGACCCGAACACCTTCGATGGTCCGGTGCTGTTGCGCCGCGCCGGTGCGCGCGAGTGGTCGAGCATACCGCTGTCGC
ATGGTTTCACCCGCAACAGTCGCGGCATCGGCGTAGCAGACATGGCGACCGCCATCCGAACGGATAGACCGCATCGCGCA
TCCGGCGAACTTGCGTACCATGTGCTCGACATTATGCACGCCATTCATGATGCATCGCGCGAGGAGCGTCACATCTTGTT
GCGCAGCGCGATGACCCGCCCGAAGCCGCTGCCGCTCGGTCTTGGCGAGCGTGGCGTTGATGCGGAGTGA

Protein sequence :
MITPANVGIIGCGNISGIYLENSRMFDALNVVAVADIDPDRAQARAAEYNVPKACSVEELLADPDIEIVINLTTPDAHGP
VALAALNAGKHVYNEKPLAVTRDEARALLDLAERKGLRVGCAPDTFLGGGLQTCRKLIDDGWIGEPIGATAFMMSHGPES
WHPNPTFFYQPGGGPMFDMGPYYLTALCVLLGPVRRVTGSARISFAERTVTGERNYGATIPVNTPTHVAGVLDFASGAVA
TIITSFDVWSSQLPRIEIYGSHGTLSVPDPNTFDGPVLLRRAGAREWSSIPLSHGFTRNSRGIGVADMATAIRTDRPHRA
SGELAYHVLDIMHAIHDASREERHILLRSAMTRPKPLPLGLGERGVDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0035 YP_001220774.1 putative dehydrogenase/oxidoreductase Not tested chp/tomA region Protein 9e-61 45
CMM_0112 YP_001220851.1 putative dehydrogenase/oxidoreductase Not tested chp/tomA region Protein 4e-61 45