Gene Information

Name : Rcas_4321 (Rcas_4321)
Accession : YP_001434363.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 5570933 - 5571517 bp
Length : 585 bp
Strand : -
Note : KEGG: rrs:RoseRS_3325 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protei

DNA sequence :
GTGACTGAAGAGAAAAAAGAACAGGAAATCCAGCCCGAGTCGGAGATACGCGATGATGATCGTCGCTGGTATGTGATTCA
TACCTACTCCGGCTATGAGAACAAAGTGAAGCAAAACCTGCTCCATCGCATTGAGACGATGGAAATGCGTGATCAGATTT
TCAACGTCATCGTGCCGACGGAAGAGGAAATTGAAATCAAAAATGGTCAGCGCCGCACAGTTCAGAAAAAGGTGTTTCCT
GGATATGTGCTGGTGCAGATGAAAATGAACGACAACTCCTGGTATGTCGTTCGCAATACGCCGGGTGTGACGAGTTTCGT
CGGGCATGGGAATAAGCCGACGCCGCTTGAAGAAGAAGAGGTGAAGGCGATCCTGAAGCAGATGGAACAGGAAGCGCCTA
AGGTGAAGGTGAGTTATCAGGTTGGTCAGGCGGTCAAGATTACGGATGGTCCGTTCACCGACTTCGAGGGGATCGTGGAC
GCAATTGACCACGAGCGTGGTCGTGTGCGGGTGCTGGTCTCGTTCTTCGGTCGTGAGGCGCCGGTCGAACTGGACTTCCT
TCAGGTGACGCGCCTGGTCGAATAG

Protein sequence :
MTEEKKEQEIQPESEIRDDDRRWYVIHTYSGYENKVKQNLLHRIETMEMRDQIFNVIVPTEEEIEIKNGQRRTVQKKVFP
GYVLVQMKMNDNSWYVVRNTPGVTSFVGHGNKPTPLEEEEVKAILKQMEQEAPKVKVSYQVGQAVKITDGPFTDFEGIVD
AIDHERGRVRVLVSFFGREAPVELDFLQVTRLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 7e-35 48
nusG YP_006310753.1 transcription antitermination protein NusG Not tested FWisland_4 Protein 1e-37 47
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 5e-38 42
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 5e-38 42