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Name : Rcas_4321 (Rcas_4321) Accession : YP_001434363.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 5570933 - 5571517 bp Length : 585 bp Strand : - Note : KEGG: rrs:RoseRS_3325 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protei DNA sequence : GTGACTGAAGAGAAAAAAGAACAGGAAATCCAGCCCGAGTCGGAGATACGCGATGATGATCGTCGCTGGTATGTGATTCA TACCTACTCCGGCTATGAGAACAAAGTGAAGCAAAACCTGCTCCATCGCATTGAGACGATGGAAATGCGTGATCAGATTT TCAACGTCATCGTGCCGACGGAAGAGGAAATTGAAATCAAAAATGGTCAGCGCCGCACAGTTCAGAAAAAGGTGTTTCCT GGATATGTGCTGGTGCAGATGAAAATGAACGACAACTCCTGGTATGTCGTTCGCAATACGCCGGGTGTGACGAGTTTCGT CGGGCATGGGAATAAGCCGACGCCGCTTGAAGAAGAAGAGGTGAAGGCGATCCTGAAGCAGATGGAACAGGAAGCGCCTA AGGTGAAGGTGAGTTATCAGGTTGGTCAGGCGGTCAAGATTACGGATGGTCCGTTCACCGACTTCGAGGGGATCGTGGAC GCAATTGACCACGAGCGTGGTCGTGTGCGGGTGCTGGTCTCGTTCTTCGGTCGTGAGGCGCCGGTCGAACTGGACTTCCT TCAGGTGACGCGCCTGGTCGAATAG Protein sequence : MTEEKKEQEIQPESEIRDDDRRWYVIHTYSGYENKVKQNLLHRIETMEMRDQIFNVIVPTEEEIEIKNGQRRTVQKKVFP GYVLVQMKMNDNSWYVVRNTPGVTSFVGHGNKPTPLEEEEVKAILKQMEQEAPKVKVSYQVGQAVKITDGPFTDFEGIVD AIDHERGRVRVLVSFFGREAPVELDFLQVTRLVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 7e-35 | 48 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 1e-37 | 47 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 5e-38 | 42 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 5e-38 | 42 |
