Gene Information

Name : Rcas_3740 (Rcas_3740)
Accession : YP_001433798.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 4906458 - 4907180 bp
Length : 723 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: rrs:RoseRS_3251 alanine racemase domain protein

DNA sequence :
ATGGAGACGCTCATTGAACGATTGTCCGCAGTGCGCGAGCGGATTGCTGCCGCTGCGCGCCGCGCGAACCGCGATCCCGC
TGCGATTCGCCTGGTGGGAGTAACGAAGGCGCAGCCGGTAGAGGCGATCCGTGCGGCACTGGCAGCCGGATTGCACGAGA
TCGGCGAAAATCGGGTGCAGGAGGCGGAAGCCAAAATGTCGGCGCTTGCGGCGGACCGCCGCCGCCTGACCTTGCACCTG
ATCGGGCATTTGCAAACCAACAAGGCAAAAAAAGCCGCCACATTGTTCGACATGGTGCATTCGGTCGATAGCCTGCGCCT
GGCGCAGATACTCGACCGCCACGCAGCCGAAACGACAGATCGTCTGCCGGTGCTCTTACAGGTGAATGTTTCTGGTGAGA
TGACCAAATCCGGGTTCGATCTGTGCCACTGGGAAACGCTGCCCGATGTCTATGATCGTTTTTGCGCCGATGTCGAGCAG
ATCCTGGCGTTGCCGCACCTTGAGGTGCGCGGGTTAATGACCATCGCGCCCTGGGGACCCGACCCGGAACAGGCGCGTCC
GGTCTTCCGCGCCGCGCGACGCCTGCGCGACTCCCTGGCGCTGCGTTTCCCCGCAACCGCCTGGCGCGACCTGTCGATGG
GTATGACCGATGACTTTGAAGTCGCCATTGAAGAAGGGGCGACCATCGTGCGGATCGGGCGGGCCATTTTTGGGGAACGG
TAA

Protein sequence :
METLIERLSAVRERIAAAARRANRDPAAIRLVGVTKAQPVEAIRAALAAGLHEIGENRVQEAEAKMSALAADRRRLTLHL
IGHLQTNKAKKAATLFDMVHSVDSLRLAQILDRHAAETTDRLPVLLQVNVSGEMTKSGFDLCHWETLPDVYDRFCADVEQ
ILALPHLEVRGLMTIAPWGPDPEQARPVFRAARRLRDSLALRFPATAWRDLSMGMTDDFEVAIEEGATIVRIGRAIFGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-23 44
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-23 44
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-23 44
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-23 44