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Name : Rcas_0353 (Rcas_0353) Accession : YP_001430503.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Virulence Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 437101 - 437793 bp Length : 693 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0114 two component transcriptional regulator, winged helix family DNA sequence : ATGGCCGCAACAATCCTCGTTGTTGAGGATGAGGAGCCGATTCTCAACCTTGTCGTCGCCTACCTGAAGGCGGATGGGTT CGCCGTACACACTGCGCGCGATGGTGAGTCGGCGCTGATGCTGGCGCAGACACTGCAACCCGATCTGATCGTTCTCGATC TGTTGCTGCCCGGAATGGACGGTCTTGAAATTTGCCGACGCTTGCAGCGCGATGGCGGTCCGTATGTGCTCATGCTGACC GCGCGCGCCGAGGAGGTCGATAAGGTCGTGGGGCTGTCCGTCGGCGCCGATGATTACCTGACCAAGCCGTTCAGTCCACG CGAGTTGGTGGCGCGTGTCAAGGCCATCCTGCGCCGGCGACGCCATACGAGTGTCGCTTCTCCAGCCGAGTCCGCCCTGT TGACCTTTCGTGACCTCCAGATCGATGTTGCGCGGCGCGAGGTGCAGCGTCGCGGCGTGCCGGTCACGTTGACGGCGCGC GAGTTCGATCTGCTCTATACGCTGGCTGCCATGCCGGGGCGTGTGTTTACGCGTGAGCAACTGCTCGAACGGGTTTGGGG ACACGATTTCGATGGCGTGGATCGAGTGGTCGATGTCCATATCAGTTTGCTGCGGAGGAAACTGGAGGATGATCCGACGG AACCGACCCTGATCCAGACGGTGCGTGGCGTCGGATACAAATTCACCGGGTAA Protein sequence : MAATILVVEDEEPILNLVVAYLKADGFAVHTARDGESALMLAQTLQPDLIVLDLLLPGMDGLEICRRLQRDGGPYVLMLT ARAEEVDKVVGLSVGADDYLTKPFSPRELVARVKAILRRRRHTSVASPAESALLTFRDLQIDVARREVQRRGVPVTLTAR EFDLLYTLAAMPGRVFTREQLLERVWGHDFDGVDRVVDVHISLLRRKLEDDPTEPTLIQTVRGVGYKFTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-36 | 43 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 5e-36 | 43 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 3e-26 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | AE016830.1.gene1681. | Protein | 6e-42 | 49 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | HE999704.1.gene2815. | Protein | 5e-38 | 49 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 1e-40 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 8e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 1e-40 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 9e-41 | 48 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_012469.1.7685629. | Protein | 8e-36 | 47 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_012469.1.7686381. | Protein | 2e-43 | 46 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | AE000516.2.gene3505. | Protein | 2e-36 | 46 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0197 | Protein | 2e-28 | 45 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_011595.7057856.p0 | Protein | 3e-32 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_010400.5986590.p0 | Protein | 1e-32 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_010410.6002989.p0 | Protein | 3e-32 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0596 | Protein | 1e-33 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0039 | Protein | 5e-34 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP000647.1.gene2531. | Protein | 2e-33 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP001138.1.gene2239. | Protein | 1e-33 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP000034.1.gene2186. | Protein | 5e-34 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002695.1.916589.p | Protein | 4e-34 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP001918.1.gene3444. | Protein | 4e-33 | 43 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP000034.1.gene3671. | Protein | 1e-39 | 43 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_008702.1.4607594. | Protein | 1e-31 | 43 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | AF130997.1.orf0.gene | Protein | 2e-32 | 42 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0308 | Protein | 3e-23 | 42 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0125 | Protein | 6e-27 | 42 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0111 | Protein | 8e-25 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_014475.1.orf0.gen | Protein | 3e-34 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_005054.2598277.p0 | Protein | 3e-34 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | DQ212986.1.gene4.p01 | Protein | 1e-33 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | AF162694.1.orf4.gene | Protein | 1e-30 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | FJ349556.1.orf0.gene | Protein | 1e-37 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | AF155139.2.orf0.gene | Protein | 3e-39 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP001485.1.gene721.p | Protein | 6e-30 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | HE999704.1.gene1528. | Protein | 8e-27 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | NC_002695.1.915041.p | Protein | 2e-28 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP001138.1.gene4273. | Protein | 7e-29 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | BAC0533 | Protein | 4e-29 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP000034.1.gene3834. | Protein | 2e-28 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP000647.1.gene4257. | Protein | 4e-29 | 41 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | CP001918.1.gene5135. | Protein | 7e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG1389 | Protein | 1e-29 | 49 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG1390 | Protein | 2e-34 | 46 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG1386 | Protein | 2e-32 | 44 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG1563 | Protein | 2e-36 | 43 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG1702 | Protein | 2e-36 | 43 |
| Rcas_0353 | YP_001430503.1 | two component transcriptional regulator | VFG0596 | Protein | 1e-26 | 42 |
