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Name : Rcas_3084 (Rcas_3084) Accession : YP_001433156.1 Strain : Roseiflexus castenholzii DSM 13941 Genome accession: NC_009767 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3995304 - 3996248 bp Length : 945 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: DNA sequence : ATGGCTCACGTTCTGGTAACCGGTGGCGCCGGCTTTATCGGTTCACACCTGGTTGAGGCGCTGCTGCGACGCGGCGATCA GGTGCGCGTCTTCGACAATTTCTCCACCGGTCGGTACGATAATCTTGCGCACATTCGTGATGATATTGAAATTATCGAGG GTGATTTGCGTGATGAAGACGCTGTGCGCCGCGCTGTCGCCGGCGTCGAGGTCATCTTTCACCAGGGTGCGCTGGCGTCG GTGCAGCGCTCAGTCGATGATCCGATTACCACGAATGCGGTAAATGTGACCGGCACGCTCCACGTGCTGACGGCAGCGCG TGACGCAGGTGCGCACCGTGTGGTCTTTGCTTCGTCATCGTCGGTCTACGGTGATACGCCAACGCTGCCCAAGGTCGAAA CGCAGGCGCCGCATCCGCTCTCGCCCTATGCGGTCTCGAAACTGGCGGGCGAACAGTATTGCATGGCGTTCAGCAGCGTC TATGGTCTGCCCGCAATTGCGCTACGATATTTCAATGTATTTGGTCCCCGGCAGGACCCGCATTCGGAGTATGCCGCCGT TATTCCCCGCTTTATCGACCGGATGGTGCGCGGTGTTCCGCCGATCATCTATGGCGATGGCTTGCAGTCGCGCGATTTTA CCTATATCGAGAATGTGGTGGACGCGAACCTGGCTGCAGCTGATGCGCCTGCCGATTGTTCAGCCGTCTTCAATGTCGGC GCCGGTGCGCGCACCTCGCTGCTCGAACTGGCGGCGCAGATCAACCATTTGCTGGGCAGTAATCTTGCGCCGGATCACCA ACCGCCACGTCCCGGCGATGTGCGCCATTCGCAGGCAAGCATCGATGCGATCCGCGAAACATTGGGGTATGCGCCACGCA TCTCACTCACCGAGGGTCTGGCGCGAACGCTCGCCTGGTTCCGTCACGAAGGAGCACGCTCATGA Protein sequence : MAHVLVTGGAGFIGSHLVEALLRRGDQVRVFDNFSTGRYDNLAHIRDDIEIIEGDLRDEDAVRRAVAGVEVIFHQGALAS VQRSVDDPITTNAVNVTGTLHVLTAARDAGAHRVVFASSSSVYGDTPTLPKVETQAPHPLSPYAVSKLAGEQYCMAFSSV YGLPAIALRYFNVFGPRQDPHSEYAAVIPRFIDRMVRGVPPIIYGDGLQSRDFTYIENVVDANLAAADAPADCSAVFNVG AGARTSLLELAAQINHLLGSNLAPDHQPPRPGDVRHSQASIDAIRETLGYAPRISLTEGLARTLAWFRHEGARS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 3e-52 | 47 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 3e-52 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rcas_3084 | YP_001433156.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 1e-52 | 47 |
