Gene Information

Name : Rcas_2530 (Rcas_2530)
Accession : YP_001432628.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 3263032 - 3264012 bp
Length : 981 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1815 ABC transporter related

DNA sequence : 
ATGGCATTCATCATCGCCGATCGACTGACCAAAACGTTTCCCGGCGAGACTCGTCCGGCAGTCGATCAGGTATCATTCGA
AATCAAGAAGGGTGAGTTCGTCGTTTTGCTGGGACCATCCGGTTGCGGCAAGACGACACTGCTCAAGATGATCAACCGTC
TCTATGAGCCGACTGAGGGCCGGCTGTTGATTGATGGCGTCGATGCGCGGTCGATGCCTGCAACGGAATTGCGCCGTCGC
ATCGGGTATGTGATCCAGCAAACCGGTCTGTTTCCCCATTTGCGTATCGAACAGAATATCGCAGTCGTGCCACAGTTGCT
CAAGTGGGATCGCGCGCGGATCGAAGCGCGGATCGATGAACTGCTTGATCTGGTAGAACTGCCGCGCGCGTACCGCAAGC
GGTATCCGCGCCAACTCTCCGGCGGCGAGCAGCAGCGCGTCGGTCTGGCGCGCGCGCTGGCTGCCGATCCATCCCTTATG
CTGATGGACGAGCCGTTCGGCGCGCTCGACGCTATCACGCGCGCCCGTTTGCAGGACGAACTGCTGCGTATTCAGCAGCG
CCTCCACAAAACGATTCTGTTTGTGACCCACGATGTGGATGAAGCGCTCCGCCTGGCGGATCGGCTATTAATTATGCGCG
CCGGGCATATCGTGCAGTTCGACACGCCGCTGGCGGTGCTGGCAGCGCCAGCAGACGATTTCGTGCGCGACCTGCTCAGC
ACGGATGATGTGCTGCGCCGCCTCAGTCTGCTGACTGTCGCCGACGCGCTGGCGGACAACGGCGCCGGCAAGCGCCTTGC
CGAAAACGATGCGCAGGAGACGCTGCAACCAGGCGATACGCTGCGTGAGGCGCTCATTCGCGTCCTGCGGGCAGGCGGTC
AGGCGCTGCCGGTCGTCGCCAATGGACAGAACGTGGGGGAGATTTCGCCGGATACCATCGCCTCGGTGCTGACACGCACA
ACCCATGCGTTATCTGATTGA

Protein sequence : 
MAFIIADRLTKTFPGETRPAVDQVSFEIKKGEFVVLLGPSGCGKTTLLKMINRLYEPTEGRLLIDGVDARSMPATELRRR
IGYVIQQTGLFPHLRIEQNIAVVPQLLKWDRARIEARIDELLDLVELPRAYRKRYPRQLSGGEQQRVGLARALAADPSLM
LMDEPFGALDAITRARLQDELLRIQQRLHKTILFVTHDVDEALRLADRLLIMRAGHIVQFDTPLAVLAAPADDFVRDLLS
TDDVLRRLSLLTVADALADNGAGKRLAENDAQETLQPGDTLREALIRVLRAGGQALPVVANGQNVGEISPDTIASVLTRT
THALSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-50 49
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-51 49