Gene Information

Name : Rcas_2237 (Rcas_2237)
Accession : YP_001432338.1
Strain : Roseiflexus castenholzii DSM 13941
Genome accession: NC_009767
Putative virulence/resistance : Unknown
Product : restriction endonuclease EcoRV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2884591 - 2885271 bp
Length : 681 bp
Strand : -
Note : PFAM: Restriction endonuclease EcoRV; KEGG: hhe:HH0239 type II restriction endonuclease

DNA sequence :
ATGGATAAAAACAATTTTTTGGATGCGCTTCAGAAAGAAGTAGATACGTTTAATTCGGCGTTTTCCACTCCAAATGGTGA
CTGGATTATCAAGGGGTTTATTGACATAGCCAAGAACATTTACACCATTTCGGCAGACACAAAAGTTATCTCAAAAATCA
TGGAACTTTTGTTGTTCCCAGAGCTTGCGCACTTCGCAGAAAAGCATGGCTTGAAAATGGTCTTATCGGAACAGCAGAAC
TTTTATCCAGACATAAGTTTTGTAGATGATGATGGTCACCGTTTTGCACTTGACTTGAAGAGTACTTACAGAGTTGATAG
TAGCCGCGTGAATGGTATGACACTCGGGGCTTTTACTGGATACTTCCGAGAAAGGAATAGCACAAAGAACATAACTTTTC
CCTACGTTTCTTATAGCGGACACTTTGTTCTGGGTGTGATTTATTCAAAGACTGATGACTTGATTGACGAGCGAAGAAGA
TACACTCTCGATGAACTTGAGCGGATTACATCTGTCATCAGAGACTTTCAGTTCTTTGCTCAAGAAAAATATCGCATTGC
GTCTGACCGTCCAGGGAGTGGCAATACCAAGAATATTGGTTCAGTCACAGAGATTGATACGCTTGTAAATGGATCTGGCT
CGTTTGCTTCGTTAGGAGAAGATGTTTTTGATGACTACTGA

Protein sequence :
MDKNNFLDALQKEVDTFNSAFSTPNGDWIIKGFIDIAKNIYTISADTKVISKIMELLLFPELAHFAEKHGLKMVLSEQQN
FYPDISFVDDDGHRFALDLKSTYRVDSSRVNGMTLGAFTGYFRERNSTKNITFPYVSYSGHFVLGVIYSKTDDLIDERRR
YTLDELERITSVIRDFQFFAQEKYRIASDRPGSGNTKNIGSVTEIDTLVNGSGSFASLGEDVFDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0239 NP_859770.1 type II restriction endonuclease Not tested HHGI1 Protein 2e-50 49